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L3_098_030G1_scaffold_448

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_030G1_scaffold_448_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(205..336)
DNA (132bp) protein (44aa)
Uncharacterized protein n=4 Tax=Staphylococcus epidermidis RepID=J0EMF5_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58626.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_030G1_scaffold_448_2

Not on your lists

784..900
DNA (117bp) protein (39aa)
Uncharacterized protein n=33 Tax=Staphylococcus epidermidis RepID=Q5HRW7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ16291.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_098_030G1_scaffold_448_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1020..1637
DNA (618bp) protein (206aa)
Uncharacterized protein n=21 Tax=Staphylococcus epidermidis RepID=Q5HRW8_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ14639.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_098_030G1_scaffold_448_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1747..2127
DNA (381bp) protein (127aa)
UPI0003D5EBCE related cluster n=1 Tax=unknown RepID=UPI0003D5EBCE
Uncharacterized protein {ECO:0000313|EMBL:ETJ14638.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
hypothetical protein
L3_098_030G1_scaffold_448_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2205..2432
DNA (228bp) protein (76aa)
Pathogenicity island protein, integrase family protein n=10 Tax=Staphylococcus epidermidis RepID=C5QAE1_STAEP
Pathogenicity island protein, integrase family protein {ECO:0000313|EMBL:EFE58623.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
hypothetical protein
L3_098_030G1_scaffold_448_6

Not on your lists

2588..2836
DNA (249bp) protein (83aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=C5QAE2_STAEP
Integrase {ECO:0000313|EMBL:ETJ38477.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_098_030G1_scaffold_448_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2799..3383
DNA (585bp) protein (195aa)
Site-specific recombinase, phage integrase family n=22 Tax=Staphylococcus epidermidis RepID=C5QAE3_STAEP
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFE58621.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
integrase-like protein
L3_098_030G1_scaffold_448_8

Not on your lists

3386..4291
DNA (906bp) protein (302aa)
Uncharacterized protein n=26 Tax=Staphylococcus epidermidis RepID=Q5HRX0_STAEQ
hypothetical protein
Abi-like protein {ECO:0000313|EMBL:ETJ38475.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_098_030G1_scaffold_448_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4699..5886)
DNA (1188bp) protein (396aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000255|HAMAP-Rule:MF_00344}; EC=6.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00344};; GMP synthetase {ECO:0000255|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000255|HAMAP-Rule:MF_00344}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
GMP synthase [glutamine-hydrolyzing] n=57 Tax=Staphylococcus epidermidis RepID=GUAA_STAEQ
L3_098_030G1_scaffold_448_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6005..7471)
DNA (1467bp) protein (489aa)
Inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Inosine-5'-monophosphate dehydrogenase n=42 Tax=Staphylococcus epidermidis RepID=IMDH_STAEQ
L3_098_030G1_scaffold_448_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7509..8777)
DNA (1269bp) protein (423aa)
Xanthine permease n=42 Tax=Staphylococcus epidermidis RepID=Q5HRX3_STAEQ
Xanthine permease
Xanthine permease {ECO:0000313|EMBL:EFE58616.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_030G1_scaffold_448_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8777..9355)
DNA (579bp) protein (193aa)
Xanthine phosphoribosyltransferase (EC:2.4.2.-)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Xanthine phosphoribosyltransferase n=54 Tax=Staphylococcus epidermidis RepID=XPT_STAEQ
L3_098_030G1_scaffold_448_13
unknown

Not on your lists

9717..9908
DNA (192bp) protein (64aa)

This feature has no annotations

L3_098_030G1_scaffold_448_14
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9952..10359
DNA (408bp) protein (136aa)
UPF0355 protein SERP0066 n=49 Tax=Staphylococcus epidermidis RepID=UP355_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ11471.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_098_030G1_scaffold_448_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10487..11152
DNA (666bp) protein (222aa)
Uncharacterized protein n=44 Tax=Staphylococcus epidermidis RepID=Q5HRX6_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53464.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_030G1_scaffold_448_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11278..11442
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J0HRA2_STAEP
Merozoite surface protein 3b
Uncharacterized protein {ECO:0000313|EMBL:ESV20769.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L3_098_030G1_scaffold_448_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11417..12094
DNA (678bp) protein (226aa)
Uncharacterized protein SE_2353 n=36 Tax=Staphylococcus epidermidis RepID=Y2353_STAES
Merozoite surface protein 3b
Uncharacterized protein {ECO:0000313|EMBL:AAW53463.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_030G1_scaffold_448_18
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12543..13697
DNA (1155bp) protein (385aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=15 Tax=Staphylococcus epidermidis RepID=H3WTP7_STAEP
Proton/sodium-glutamate symport protein
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter DAACS family protein {ECO:0000313|EMBL:ETJ11468.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_098_030G1_scaffold_448_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13819..14574)
DNA (756bp) protein (252aa)
NADPH-dependent oxidoreductase; EC=1.6.-.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NADPH-dependent oxidoreductase n=32 Tax=Staphylococcus epidermidis RepID=NFRA_STAEQ
Nitroreductase family protein
L3_098_030G1_scaffold_448_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14715..15494
DNA (780bp) protein (260aa)
2-keto-4-pentenoate hydratase, putative n=19 Tax=Staphylococcus epidermidis RepID=Q5HRY0_STAEQ
2-keto-4-pentenoate hydratase
Hydratase/decarboxylase {ECO:0000313|EMBL:EFE58608.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_030G1_scaffold_448_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15939..16508
DNA (570bp) protein (190aa)
Alkyl hydroperoxide reductase subunit C; EC=1.11.1.15;; Peroxiredoxin; Thioredoxin peroxidase; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Alkyl hydroperoxide reductase subunit C n=21 Tax=Staphylococcus epidermidis RepID=AHPC_STAEQ
ahpC; alkyl hydroperoxide reductase
L3_098_030G1_scaffold_448_22
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16523..18046
DNA (1524bp) protein (508aa)
ahpF; alkyl hydroperoxide reductase (EC:1.8.1.-)
Alkyl hydroperoxide reductase subunit F n=21 Tax=Staphylococcus epidermidis RepID=AHPF_STAEQ
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:ETJ11464.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_098_030G1_scaffold_448_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18125..18724
DNA (600bp) protein (200aa)
Uncharacterized protein n=38 Tax=Staphylococcus epidermidis RepID=Q5HRY4_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58604.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_030G1_scaffold_448_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18944..19321
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=I0TJC6_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58603.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_030G1_scaffold_448_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19480..20070)
DNA (591bp) protein (197aa)
Phosphoglycerate mutase family protein n=24 Tax=Staphylococcus epidermidis RepID=Q5HRY8_STAEQ
phosphoglycerate mutase family protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EFE58602.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_030G1_scaffold_448_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20091..20723)
DNA (633bp) protein (211aa)
Efflux protein, LysE family n=50 Tax=Staphylococcus epidermidis RepID=Q5HRY9_STAEQ
Threonine efflux protein
Efflux protein, LysE family {ECO:0000313|EMBL:AAW53443.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_030G1_scaffold_448_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21195..21449)
DNA (255bp) protein (85aa)
Uncharacterized protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HRZ1_STAEQ
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ESV20782.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L3_098_030G1_scaffold_448_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21671..21931
DNA (261bp) protein (87aa)
Uncharacterized protein n=48 Tax=Staphylococcus epidermidis RepID=Q5HRZ2_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53440.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_030G1_scaffold_448_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22581..23090)
DNA (510bp) protein (170aa)
Single-stranded DNA-binding protein n=46 Tax=Staphylococcus epidermidis RepID=Q5HRZ4_STAEQ
ssb; single-stranded DNA-binding family protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_030G1_scaffold_448_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(23113..23409)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=81 Tax=Staphylococcus epidermidis RepID=RS6_STAEQ
SSU ribosomal protein S6p
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Displaying items 1-30 of 49 in total

View Taxonomy