ggKbase home page

L3_098_030G1_scaffold_500

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_030G1_scaffold_500_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(127..1170)
DNA (1044bp) protein (348aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Aldose 1-epimerase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX27_CLOPF
aldose 1-epimerase
L3_098_030G1_scaffold_500_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1375..2538
DNA (1164bp) protein (388aa)
galK; galactokinase (EC:2.7.1.6)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Galactokinase n=5 Tax=Clostridium perfringens RepID=GAL1_CLOP1
L3_098_030G1_scaffold_500_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2661..4157
DNA (1497bp) protein (499aa)
galT; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000255|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000255|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000255|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000255|HAMAP-Rule:MF_00571}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSB8_CLOPF
L3_098_030G1_scaffold_500_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4348..6003)
DNA (1656bp) protein (552aa)
Probable uridine kinase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKP7_CLOPE
Probable uridine kinase {ECO:0000313|EMBL:BAB81053.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
uridine kinase
L3_098_030G1_scaffold_500_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6134..6832
DNA (699bp) protein (233aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XKP6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81054.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_500_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6829..7263
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CR31_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17123.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_098_030G1_scaffold_500_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7360..8226
DNA (867bp) protein (289aa)
fba; fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=11 Tax=Clostridium perfringens RepID=H7CW30_CLOPF
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EIA17124.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_098_030G1_scaffold_500_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8272..9315)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSC3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17125.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_098_030G1_scaffold_500_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9455..10018
DNA (564bp) protein (188aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CW32_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81058.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_500_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10258..10860)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQT6_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17127.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_098_030G1_scaffold_500_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11001..12578)
DNA (1578bp) protein (526aa)
NlpC/P60 family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJM2_CLOPF
NlpC/P60 family protein {ECO:0000313|EMBL:EDT25849.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
NlpC/P60 family protein
L3_098_030G1_scaffold_500_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12791..13159)
DNA (369bp) protein (123aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CW35_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13743.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_098_030G1_scaffold_500_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13347..13733
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKN8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81062.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_500_14
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14264..15862)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C7S4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA69129.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L3_098_030G1_scaffold_500_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15955..16440)
DNA (486bp) protein (162aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQT1_CLOP1
ybaK/ebsC protein
L3_098_030G1_scaffold_500_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16577..17005)
DNA (429bp) protein (143aa)
Gp21 protein n=2 Tax=root RepID=Q8SBN3_9CAUD
Gp21 protein {ECO:0000313|EMBL:EDT22908.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_098_030G1_scaffold_500_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17100..18155)
DNA (1056bp) protein (352aa)
Glycosyl hydrolase, family 25 n=2 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIV6_CLOPF
Glycosyl hydrolase, family 25 {ECO:0000313|EMBL:EDT26105.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_098_030G1_scaffold_500_18
Clostridium phage vB_CpeS-CP51, Caudovirales, Viruses

Not on your lists

comp(18205..18642)
DNA (438bp) protein (146aa)
Toxin secretion/phage lysis holin n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX42_CLOPF
toxin secretion/phage lysis holin
Putative holin {ECO:0000313|EMBL:AGH27914.1}; TaxID=1305708 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage vB_CpeS-CP51.;"
L3_098_030G1_scaffold_500_19
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18683..20374)
DNA (1692bp) protein (564aa)
Phage endopeptidase n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q0T0_CLONN
Phage endopeptidase
Phage endopeptidase {ECO:0000313|EMBL:ABK61441.1}; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi (strain NT).;"
L3_098_030G1_scaffold_500_20
unknown

Not on your lists

comp(20386..20925)
DNA (540bp) protein (180aa)

This feature has no annotations

L3_098_030G1_scaffold_500_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20927..21631)
DNA (705bp) protein (235aa)
Phage putative tail component, N-domain protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BB44_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KEH95746.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT12695.;"
hypothetical protein
L3_098_030G1_scaffold_500_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21645..24602)
DNA (2958bp) protein (986aa)
Phage tail tape measure protein, family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RT38_CLOPF
Phage tail tape measure protein {ECO:0000313|EMBL:CEQ19657.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_098_030G1_scaffold_500_23
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24617..24958)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii ATCC 9714 RepID=T0EDK1_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:EPZ61788.1}; TaxID=1292036 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] sordellii ATCC 9714.;"
hypothetical protein
L3_098_030G1_scaffold_500_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25144..25461)
DNA (318bp) protein (106aa)
Gp12 protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUA8_CLOPF
Gp12 protein {ECO:0000313|EMBL:EDT14696.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_098_030G1_scaffold_500_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25522..26163)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XLB5_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80833.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_500_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26185..26529)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XLB6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80832.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_500_27
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26540..26983)
DNA (444bp) protein (148aa)
Phage protein, HK97 gp10 family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RT33_CLOPF
HK97 family phage protein {ECO:0000313|EMBL:CEQ19662.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_098_030G1_scaffold_500_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26984..27310)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XLB8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80830.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_500_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27303..27581)
DNA (279bp) protein (93aa)
Gp7 protein n=2 Tax=root RepID=Q8SBP7_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:EDT22867.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
QlrG family phage protein
L3_098_030G1_scaffold_500_30
Clostridium phage phi3626, Caudovirales, Viruses

Not on your lists

comp(27600..28829)
DNA (1230bp) protein (410aa)
Major capsid protein n=3 Tax=root RepID=Q8SBP8_9CAUD
Major capsid protein {ECO:0000313|EMBL:AAL96776.1}; TaxID=190478 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage phi3626.;"
HK97 family phage major capsid protein
Displaying items 1-30 of 76 in total

View Taxonomy