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L3_098_030G1_scaffold_502

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_030G1_scaffold_502_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(267..722)
DNA (456bp) protein (152aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
S-ribosylhomocysteine lyase n=6 Tax=Clostridium perfringens RepID=LUXS_CLOPE
luxS; S-ribosylhomocysteinase
L3_098_030G1_scaffold_502_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(820..1728)
DNA (909bp) protein (303aa)
Cysteine synthase family protein n=2 Tax=Clostridium perfringens RepID=B1BKL3_CLOPF
Cysteine synthase family protein {ECO:0000313|EMBL:EDS79679.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
cysK; cysteine synthase
L3_098_030G1_scaffold_502_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1715..2869)
DNA (1155bp) protein (385aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:EDT15473.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EDT15473.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
metC; cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase n=2 Tax=Clostridium perfringens RepID=B1BS21_CLOPF
L3_098_030G1_scaffold_502_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2933..3556)
DNA (624bp) protein (208aa)
UbiE/COQ5 family methyltransferase n=6 Tax=Clostridium perfringens RepID=H7CRX3_CLOPF
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EDT23890.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
UbiE/COQ5 family methlytransferase
L3_098_030G1_scaffold_502_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4301..4759
DNA (459bp) protein (153aa)
Large-conductance mechanosensitive channel n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKL0_CLOPF
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
mscL; large-conductance mechanosensitive channel
L3_098_030G1_scaffold_502_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4907..6853)
DNA (1947bp) protein (649aa)
Microbial collagenase {ECO:0000313|EMBL:EDT27349.1}; EC=3.4.24.3 {ECO:0000313|EMBL:EDT27349.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Microbial collagenase n=2 Tax=Clostridium perfringens RepID=B1RQY6_CLOPF
colA; collagenase
L3_098_030G1_scaffold_502_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6846..8153)
DNA (1308bp) protein (436aa)
colA; collagenase (EC:3.4.24.3)
Microbial collagenase n=2 Tax=Clostridium perfringens RepID=Q0TUR0_CLOP1
Collagenase {ECO:0000313|EMBL:EIA18611.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_098_030G1_scaffold_502_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8697..9152)
DNA (456bp) protein (152aa)
Arginine regulator n=6 Tax=Clostridium perfringens RepID=ARGR1_CLOPE
argR; arginine repressor ArgR
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_098_030G1_scaffold_502_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9225..10169)
DNA (945bp) protein (315aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=5 Tax=Clostridium perfringens RepID=H7CRW9_CLOPF
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_098_030G1_scaffold_502_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10230..11666)
DNA (1437bp) protein (479aa)
Arginine/ornithine antiporter n=2 Tax=Clostridium perfringens RepID=ARCD_CLOPE
arcD; arginine/ornithine antiporter
Arginine/ornithine antiporter; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_098_030G1_scaffold_502_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11811..12806)
DNA (996bp) protein (332aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ornithine carbamoyltransferase, catabolic n=8 Tax=Clostridium perfringens RepID=OTCC_CLOP1
L3_098_030G1_scaffold_502_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12906..14147)
DNA (1242bp) protein (414aa)
arcA; arginine deiminase (EC:3.5.3.6)
Arginine deiminase {ECO:0000255|HAMAP-Rule:MF_00242}; Short=ADI {ECO:0000255|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000255|HAMAP-Rule:MF_00242};; Arginine dihydrolase {ECO:0000255|HAMAP-Rule:MF_00242}; Short=AD {ECO:0000255|HAMAP-Rule:MF_00242};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Arginine deiminase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=ARCA_CLOPS
L3_098_030G1_scaffold_502_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14580..16649)
DNA (2070bp) protein (690aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Beta-galactosidase n=1 Tax=Clostridium perfringens F262 RepID=H7CRW5_CLOPF
pbg; beta-galactosidase
L3_098_030G1_scaffold_502_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16808..18295)
DNA (1488bp) protein (496aa)
Membrane-spanning transporter protein n=5 Tax=Clostridium perfringens RepID=H7CRW4_CLOPF
membrane-spanning transporter protein
Amino acid permease family protein {ECO:0000313|EMBL:EDT15530.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_098_030G1_scaffold_502_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19047..19265)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q0SWK9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85378.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_098_030G1_scaffold_502_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19337..19906)
DNA (570bp) protein (190aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CRW3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18603.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_098_030G1_scaffold_502_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19990..21492)
DNA (1503bp) protein (501aa)
Perfringolysin O n=2 Tax=Clostridium perfringens RepID=B1BKK5_CLOPF
Perfringolysin O {ECO:0000313|EMBL:ABG67694.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
pfoA; perfringolysin O
L3_098_030G1_scaffold_502_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22080..23111)
DNA (1032bp) protein (344aa)
Putative membrane protein n=6 Tax=Clostridium perfringens RepID=Q0SWL1_CLOPS
regulatory protein pfoR
Putative membrane protein {ECO:0000313|EMBL:ABG86349.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_098_030G1_scaffold_502_19
unknown

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comp(23501..23611)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_098_030G1_scaffold_502_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23632..24243)
DNA (612bp) protein (204aa)
Protein T24A6.7 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWL2_CLOPS
hypothetical protein
Protein T24A6.7 {ECO:0000313|EMBL:ABG85925.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Displaying 20 items

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