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L3_098_047G1_scaffold_2

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Displaying items 1-30 of 232 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_2_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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300..1232
DNA (933bp) protein (311aa)
Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JM80_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723, ECO:0000313|EMBL:CBK92915.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_047G1_scaffold_2_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1338..3143
DNA (1806bp) protein (602aa)
oligopeptidase F. Metallo peptidase. MEROPS family M03B (EC:3.4.24.-)
Oligopeptidase F. Metallo peptidase. MEROPS family M03B {ECO:0000313|EMBL:CBK92914.1}; EC=3.4.24.- {ECO:0000313|EMBL:CBK92914.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Oligopeptidase F. Metallo peptidase. MEROPS family M03B n=1 Tax=Eubacterium rectale M104/1 RepID=D4JM79_9FIRM
L3_098_047G1_scaffold_2_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3158..3616
DNA (459bp) protein (153aa)
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
LuxS protein involved in autoinducer AI2 synthesis n=2 Tax=Eubacterium rectale RepID=D6E0Z7_9FIRM
L3_098_047G1_scaffold_2_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3786..4481
DNA (696bp) protein (232aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=2 Tax=Eubacterium RepID=D6E0Z8_9FIRM
L3_098_047G1_scaffold_2_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4530..5381
DNA (852bp) protein (284aa)
Predicted xylanase/chitin deacetylase n=2 Tax=Eubacterium RepID=D4JM76_9FIRM
Predicted xylanase/chitin deacetylase
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CBK92911.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_047G1_scaffold_2_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5519..5665
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TUU0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91521.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_098_047G1_scaffold_2_7
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5906..9673
DNA (3768bp) protein (1256aa)
Cation/multidrug efflux pump n=1 Tax=Eubacterium rectale CAG:36 RepID=R6US56_9FIRM
Cation/multidrug efflux pump {ECO:0000313|EMBL:CDC73557.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Cation/multidrug efflux pump
L3_098_047G1_scaffold_2_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9724..11220
DNA (1497bp) protein (499aa)
glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Glycerol kinase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JM73_9FIRM
L3_098_047G1_scaffold_2_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11245..12738
DNA (1494bp) protein (498aa)
Predicted dehydrogenase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JM72_9FIRM
Predicted dehydrogenase
Predicted dehydrogenase {ECO:0000313|EMBL:CBK92907.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_047G1_scaffold_2_10
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12813..14108
DNA (1296bp) protein (432aa)
Sarcosine oxidase alpha subunit n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TJI2_9FIRM
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:CDC73543.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
sarcosine oxidase alpha subunit
L3_098_047G1_scaffold_2_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14113..14472
DNA (360bp) protein (120aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U0A4_9FIRM
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:CDC73541.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
NAD(FAD)-dependent dehydrogenase
L3_098_047G1_scaffold_2_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14490..15728
DNA (1239bp) protein (413aa)
Transcriptional regulator/sugar kinase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E113_9FIRM
Transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CBK91534.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_098_047G1_scaffold_2_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15806..16072
DNA (267bp) protein (89aa)
Addiction module antitoxin, RelB/DinJ family n=4 Tax=Eubacterium RepID=D4JM69_9FIRM
addiction module antitoxin, RelB/DinJ family
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:CBK92904.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_047G1_scaffold_2_14
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16072..16332
DNA (261bp) protein (87aa)
Toxin-antitoxin system, toxin component, Txe/YoeB family n=4 Tax=Eubacterium RepID=D4JM68_9FIRM
toxin-antitoxin system, toxin component, Txe/YoeB family
Uncharacterized protein {ECO:0000313|EMBL:CDC73535.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_098_047G1_scaffold_2_15
unknown

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16457..16888
DNA (432bp) protein (144aa)

This feature has no annotations

L3_098_047G1_scaffold_2_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17058..19706
DNA (2649bp) protein (883aa)
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Valine--tRNA ligase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E116_9FIRM
L3_098_047G1_scaffold_2_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19841..21337
DNA (1497bp) protein (499aa)
Beta-xylosidase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JM66_9FIRM
Beta-xylosidase
Beta-xylosidase {ECO:0000313|EMBL:CBK92901.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_047G1_scaffold_2_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21591..22979
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGA2_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76308.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_047G1_scaffold_2_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23105..23260
DNA (156bp) protein (52aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6UJE3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76307.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_047G1_scaffold_2_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23257..24624
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E120_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91541.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_098_047G1_scaffold_2_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24726..25034
DNA (309bp) protein (103aa)
Anti-sigma factor antagonist n=3 Tax=Eubacterium RepID=C4ZG99_EUBR3
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_098_047G1_scaffold_2_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25078..25557
DNA (480bp) protein (160aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=3 Tax=Eubacterium rectale RepID=D4JM61_9FIRM
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ACR76304.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_047G1_scaffold_2_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25554..26228
DNA (675bp) protein (225aa)
RNA polymerase sigma-F factor n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZG97_EUBR3
RNA polymerase sigma-F factor
RNA polymerase sigma-F factor {ECO:0000313|EMBL:ACR76303.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_047G1_scaffold_2_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26302..26721)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZG96_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76302.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_047G1_scaffold_2_25
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26930..27688
DNA (759bp) protein (253aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UJC5_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CDC70902.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_098_047G1_scaffold_2_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27837..29186
DNA (1350bp) protein (450aa)
Transporter UIT6 family (TC 9.B.53) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TBW4_9FIRM
Transporter UIT6 family (TC 9.B.53) {ECO:0000313|EMBL:CDC70898.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
transporter, UIT6 family (TC 9.B.53)
L3_098_047G1_scaffold_2_27
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29199..30194
DNA (996bp) protein (332aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6TF64_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC70895.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_098_047G1_scaffold_2_28
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30322..30816
DNA (495bp) protein (165aa)
Transcriptional regulators, similar to M. xanthus CarD n=2 Tax=Eubacterium rectale RepID=D6E127_9FIRM
Transcriptional regulators, similar to M. xanthus CarD
Uncharacterized protein {ECO:0000313|EMBL:ACR76298.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_047G1_scaffold_2_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31029..31730
DNA (702bp) protein (234aa)
Phosphatidylserine synthase (EC:2.7.8.8)
Phosphatidylserine synthase {ECO:0000313|EMBL:CBK91549.1}; EC=2.7.8.8 {ECO:0000313|EMBL:CBK91549.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Phosphatidylserine synthase n=2 Tax=Eubacterium RepID=D6E128_9FIRM
L3_098_047G1_scaffold_2_30
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31730..32551
DNA (822bp) protein (274aa)
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350, ECO:0000313|EMBL:CBK91550.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Phosphatidylserine decarboxylase n=3 Tax=Eubacterium RepID=C4ZG90_EUBR3
Displaying items 1-30 of 232 in total

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