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L3_098_047G1_scaffold_3

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Displaying items 1-30 of 280 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_3_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1..159)
DNA (159bp) protein (53aa)
30S ribosomal protein S4 n=1 Tax=Staphylococcus aureus subsp. aureus CIG290 RepID=H4HPX1_STAAU
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=158878 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain Mu50 / ATCC 700699).;"
L3_098_047G1_scaffold_3_2
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(391..858)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Staphylococcus hominis RepID=UPI0002E9D861
GAF domain-containing protein {ECO:0000313|EMBL:EUZ70615.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
GAF domain-containing protein
L3_098_047G1_scaffold_3_3
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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990..2684
DNA (1695bp) protein (565aa)
septation ring formation regulator EzrA n=1 Tax=Staphylococcus hominis RepID=UPI0002FA0062
Septation ring formation regulator EzrA {ECO:0000313|EMBL:EUZ70614.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
ezrA; septation ring formation regulator
L3_098_047G1_scaffold_3_4
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2847..3983
DNA (1137bp) protein (379aa)
aminotransferase n=1 Tax=Staphylococcus hominis RepID=UPI0002F602C4
Cysteine desulfurase {ECO:0000313|EMBL:EUZ70613.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_098_047G1_scaffold_3_5
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3984..5207
DNA (1224bp) protein (408aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
thiamine biosynthesis protein ThiI n=1 Tax=Staphylococcus hominis RepID=UPI0002EA78DA
thiI; thiamine biosynthesis protein ThiI
L3_098_047G1_scaffold_3_6
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5238..6023
DNA (786bp) protein (262aa)
membrane protein n=1 Tax=Staphylococcus hominis RepID=UPI0003171C7F
Uncharacterized protein {ECO:0000313|EMBL:EUZ70611.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
sulfite exporter TauE/SafE-like protein
L3_098_047G1_scaffold_3_7
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6117..6611
DNA (495bp) protein (165aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
Probable thiol peroxidase n=3 Tax=Staphylococcus hominis RepID=C2LWB5_STAHO
tpx; thiol peroxidase
L3_098_047G1_scaffold_3_8
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6660..7682
DNA (1023bp) protein (341aa)
N-6 DNA Methylase n=1 Tax=Staphylococcus hominis VCU122 RepID=H3VIJ8_STAHO
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:EUZ70609.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
Adenine-specific DNA methylase-like protein
L3_098_047G1_scaffold_3_9
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7765..8961
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
acetate kinase (EC:2.7.2.1)
acetate kinase n=1 Tax=Staphylococcus hominis RepID=UPI0002D287E0
L3_098_047G1_scaffold_3_10
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9144..9641)
DNA (498bp) protein (166aa)
Universal stress protein n=3 Tax=Staphylococcus hominis RepID=C2LYF4_STAHO
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
uspA_1; universal stress protein
L3_098_047G1_scaffold_3_11
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9794..10912
DNA (1119bp) protein (373aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
alanine dehydrogenase n=1 Tax=Staphylococcus hominis RepID=UPI0003802E5B
ald; alanine dehydrogenase
L3_098_047G1_scaffold_3_12
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11002..12057)
DNA (1056bp) protein (352aa)
dipeptidase n=1 Tax=Staphylococcus hominis RepID=UPI0002E5620B
Proline dipeptidase {ECO:0000313|EMBL:EUZ70605.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
hypothetical protein
L3_098_047G1_scaffold_3_13
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12187..12876
DNA (690bp) protein (230aa)
UPF0173 metal-dependent hydrolase STAHO0001_1831 n=3 Tax=Staphylococcus hominis RepID=C2LYF1_STAHO
UPF0173 metal-dependent hydrolase O552_00511 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
metal-dependent hydrolase
L3_098_047G1_scaffold_3_14
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12935..13348)
DNA (414bp) protein (138aa)
universal stress protein UspA n=1 Tax=Staphylococcus hominis RepID=UPI0003094357
Universal stress protein {ECO:0000313|EMBL:EUZ70603.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
uspA_2; universal stress protein
L3_098_047G1_scaffold_3_15
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13565..14863
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Staphylococcus hominis RepID=UPI0002E59598
CBS domain-containing protein {ECO:0000313|EMBL:EUZ70602.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
transcriptional regulator
L3_098_047G1_scaffold_3_16
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14894..15832
DNA (939bp) protein (313aa)
oligoribonuclease n=1 Tax=Staphylococcus hominis RepID=UPI0002F43251
Phosphoesterase RecJ domain-containing protein {ECO:0000313|EMBL:EUZ70601.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
exopolyphosphatase-like protein
L3_098_047G1_scaffold_3_17
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15853..19056
DNA (3204bp) protein (1068aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
DNA polymerase III subunit alpha n=1 Tax=Staphylococcus hominis RepID=UPI0002EC158E
dnaE; DNA polymerase III subunit alpha
L3_098_047G1_scaffold_3_18
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19255..19416
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Staphylococcus hominis RepID=UPI00030CA898
Uncharacterized protein {ECO:0000313|EMBL:EUZ70599.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
NADP-dependent malic enzyme
L3_098_047G1_scaffold_3_19
unknown

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19397..19531
DNA (135bp) protein (45aa)

This feature has no annotations

L3_098_047G1_scaffold_3_20
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19724..20590
DNA (867bp) protein (289aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
accB; acetyl-CoA carboxylase subunit beta (EC:6.4.1.2)
acetyl-CoA carboxylase subunit beta n=1 Tax=Staphylococcus hominis RepID=UPI0002DE16CE
L3_098_047G1_scaffold_3_21
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20583..21527
DNA (945bp) protein (315aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Staphylococcus hominis RepID=UPI00031F2554
L3_098_047G1_scaffold_3_22
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21663..22667
DNA (1005bp) protein (335aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
6-phosphofructokinase n=1 Tax=Staphylococcus hominis RepID=UPI0003137A81
pfkA; 6-phosphofructokinase
L3_098_047G1_scaffold_3_23
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22685..24445
DNA (1761bp) protein (587aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
pyruvate kinase n=1 Tax=Staphylococcus hominis RepID=UPI00031AC49B
pykA; pyruvate kinase
L3_098_047G1_scaffold_3_24
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24752..26104)
DNA (1353bp) protein (451aa)
alanine glycine permease n=1 Tax=Staphylococcus hominis RepID=UPI0002E512DF
D-serine/D-alanine/glycine transporter {ECO:0000313|EMBL:EUZ70594.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
D-serine/D-alanine/glycine transporter
L3_098_047G1_scaffold_3_25
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26412..27572
DNA (1161bp) protein (387aa)
citrate synthase n=1 Tax=Staphylococcus RepID=UPI000317B272
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
citZ; methylcitrate synthase
L3_098_047G1_scaffold_3_26
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27608..28879
DNA (1272bp) protein (424aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
isocitrate dehydrogenase n=1 Tax=Staphylococcus hominis RepID=UPI00030B5F79
citC; isocitrate dehydrogenase
L3_098_047G1_scaffold_3_27
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29104..29814
DNA (711bp) protein (237aa)
PhoP family transcriptional regulator n=1 Tax=Staphylococcus RepID=UPI0002E58A42
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP {ECO:0000313|EMBL:EUZ70591.1}; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
phoP; alkaline phosphatase synthesis transcriptional regulatory protein
L3_098_047G1_scaffold_3_28
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29814..31511
DNA (1698bp) protein (566aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
sensor histidine kinase n=1 Tax=Staphylococcus hominis RepID=UPI0002F1B8B2
phoR; alkaline phosphatase synthesis sensor protein
L3_098_047G1_scaffold_3_29
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31692..34328
DNA (2637bp) protein (879aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
DNA polymerase I n=1 Tax=Staphylococcus hominis RepID=UPI00030CB7AC
polA; DNA polymerase I
L3_098_047G1_scaffold_3_30
Staphylococcus sp. M0480, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34344..35216
DNA (873bp) protein (291aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054019};; TaxID=1388318 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. M0480.;"
formamidopyrimidine-DNA glycosylase n=1 Tax=Staphylococcus hominis RepID=UPI0002D8B8A7
hypothetical protein
Displaying items 1-30 of 280 in total

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