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L3_098_047G1_scaffold_83

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Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_83_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..1631
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAM6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFK61364.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_098_047G1_scaffold_83_2
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1588..2520)
DNA (933bp) protein (311aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
tRNA-dihydrouridine synthase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAM5_9BACE
dihydrouridine synthase
L3_098_047G1_scaffold_83_3
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2522..3187)
DNA (666bp) protein (222aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Octanoyltransferase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAM4_9BACE
lipoate-protein ligase B
L3_098_047G1_scaffold_83_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3133..3933)
DNA (801bp) protein (267aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAM3_9BACE
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
L3_098_047G1_scaffold_83_5
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4074..5732
DNA (1659bp) protein (553aa)
AMP-binding enzyme n=9 Tax=Bacteroidales RepID=C7XA78_9PORP
AMP-binding enzyme family protein {ECO:0000313|EMBL:EFI07287.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
long-chain-fatty-acid--CoA ligase
L3_098_047G1_scaffold_83_6
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5783..6292)
DNA (510bp) protein (170aa)
RNA polymerase ECF-type sigma factor n=8 Tax=Bacteroidales RepID=A6L9D8_PARD8
RNA polymerase ECF-type sigma factor
Sigma-70 region 2 {ECO:0000313|EMBL:EFK61369.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_098_047G1_scaffold_83_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6558..7937
DNA (1380bp) protein (460aa)
Putative endopeptidase Clp n=1 Tax=Parabacteroides sp. D13 RepID=C7XA76_9PORP
Putative endopeptidase Clp {ECO:0000313|EMBL:EEU51153.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
membrane-bound serine protease
L3_098_047G1_scaffold_83_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7944..8579)
DNA (636bp) protein (212aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6L9D6_PARD8
hypothetical protein
Divergent AAA domain protein {ECO:0000313|EMBL:KDS65452.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_098_047G1_scaffold_83_9
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8650..10920
DNA (2271bp) protein (757aa)
TrkA C-terminal domain protein n=2 Tax=Bacteroidales RepID=C7XA74_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:EEY84281.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Na+/H+ antiporter
L3_098_047G1_scaffold_83_10
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10935..11690
DNA (756bp) protein (252aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=4 Tax=Parabacteroides RepID=C7XA73_9PORP
L3_098_047G1_scaffold_83_11
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11707..13431)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ATX6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27050.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_098_047G1_scaffold_83_12
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13680..15581)
DNA (1902bp) protein (634aa)
Membrane protein insertase YidC n=2 Tax=Bacteroidales RepID=C7XA71_9PORP
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
inner membrane protein translocase component YidC
L3_098_047G1_scaffold_83_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15592..17199)
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=6 Tax=Bacteroidales RepID=C7XA70_9PORP
L3_098_047G1_scaffold_83_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17620..19161
DNA (1542bp) protein (514aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1YY23_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61378.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_098_047G1_scaffold_83_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19263..19679
DNA (417bp) protein (139aa)
Positive regulator of sigma(E), RseC/MucC n=2 Tax=Parabacteroides RepID=E1YY24_9PORP
Positive regulator of sigma(E), RseC/MucC {ECO:0000313|EMBL:EFK61379.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_098_047G1_scaffold_83_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19689..20621
DNA (933bp) protein (311aa)
Ferredoxin n=2 Tax=Parabacteroides RepID=E1YY25_9PORP
Ferredoxin {ECO:0000313|EMBL:EFK61380.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ferredoxin
L3_098_047G1_scaffold_83_17
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20633..21964
DNA (1332bp) protein (444aa)
Electron transport complex protein RnfC n=5 Tax=Bacteroidales RepID=A6L9C7_PARD8
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
electron transport complex protein RnfC
L3_098_047G1_scaffold_83_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21977..22945
DNA (969bp) protein (323aa)
Electron transport complex protein RnfD n=7 Tax=Bacteroidales RepID=A6L9C6_PARD8
electron transport complex protein RnfD
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_098_047G1_scaffold_83_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22978..23562
DNA (585bp) protein (195aa)
Electron transport complex, protein RnfG n=8 Tax=Bacteroidales RepID=A6L9C5_PARD8
electron transport complex protein RnfG
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_098_047G1_scaffold_83_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23580..24164
DNA (585bp) protein (195aa)
Electron transport complex, RnfABCDGE type, E subunit n=3 Tax=Bacteroidales RepID=D7IWF5_9BACE
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
electron transport complex protein RsxE
L3_098_047G1_scaffold_83_21
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24177..24749
DNA (573bp) protein (191aa)
Electron transport complex protein RnfA n=8 Tax=Bacteroidales RepID=A6L9C3_PARD8
electron transport complex protein RnfA
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_098_047G1_scaffold_83_22
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24775..25815
DNA (1041bp) protein (347aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EFK61386.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EFK61386.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
UDP-glucose 4-epimerase n=9 Tax=Bacteroidales RepID=C7XA61_9PORP
UDP-glucose 4-epimerase
L3_098_047G1_scaffold_83_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25886..27790)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6AU18_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27246.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
two-component hybrid sensor kinase/response regulator
L3_098_047G1_scaffold_83_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27732..28268)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6AUJ8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27245.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
two-component hybrid sensor kinase/response regulator
L3_098_047G1_scaffold_83_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28307..28939)
DNA (633bp) protein (211aa)
HAD hydrolase, family IA n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6AGW8_9PORP
HAD hydrolase, family IA {ECO:0000313|EMBL:EKN27244.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
haloacid dehalogenase
L3_098_047G1_scaffold_83_26
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29062..30309)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YY33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK61388.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_098_047G1_scaffold_83_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30382..31305)
DNA (924bp) protein (308aa)
D-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EFK61389.1}; EC=1.1.1.95 {ECO:0000313|EMBL:EFK61389.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
D-3-phosphoglycerate dehydrogenase n=9 Tax=Bacteroidales RepID=A6L9B8_PARD8
D-3-phosphoglycerate dehydrogenase
L3_098_047G1_scaffold_83_28
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31323..32390)
DNA (1068bp) protein (356aa)
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Phosphoserine aminotransferase n=9 Tax=Bacteroidales RepID=SERC_PARD8
L3_098_047G1_scaffold_83_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32523..33794)
DNA (1272bp) protein (424aa)
Replication-associated recombination protein A n=5 Tax=Bacteroidales RepID=D0TAJ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN27033.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
recombination factor protein RarA
L3_098_047G1_scaffold_83_30
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34276..35805)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6L9B5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEY84261.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Displaying items 1-30 of 126 in total

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