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L3_098_047G1_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_175_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6ANV0_9PORP
integrase
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFK62050.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_098_047G1_scaffold_175_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

147..1637
DNA (1491bp) protein (497aa)
Cobyric acid synthase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TBC8_9BACE
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
cobyric acid synthase
L3_098_047G1_scaffold_175_3
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1642..2964
DNA (1323bp) protein (441aa)
Tat pathway signal sequence domain protein n=4 Tax=Bacteroidales RepID=D0TBC7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN28559.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
NADH-dependent dyhydrogenase
L3_098_047G1_scaffold_175_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3073..3582
DNA (510bp) protein (170aa)
Ferritin-like protein n=9 Tax=Bacteroidales RepID=C7XAZ7_9PORP
bacterioferritin-like protein
Ferritin-like protein {ECO:0000313|EMBL:EEY84539.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_098_047G1_scaffold_175_5
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3671..4243)
DNA (573bp) protein (191aa)
ThiJ/PfpI family protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ITN5_9BACE
ThiJ/PfpI family protein {ECO:0000313|EMBL:EFI08185.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
ThiJ family intracellular protease
L3_098_047G1_scaffold_175_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4255..5526)
DNA (1272bp) protein (424aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Two-component system sensor histidine kinase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ITN4_9BACE
two-component system sensor histidine kinase
L3_098_047G1_scaffold_175_7
unknown

Not on your lists

5554..5697
DNA (144bp) protein (48aa)

This feature has no annotations

L3_098_047G1_scaffold_175_8
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5725..7026
DNA (1302bp) protein (434aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Phenylacetate-coenzyme A ligase n=6 Tax=Bacteroidales RepID=A6LBR0_PARD8
phenylacetate-coenzyme A ligase
L3_098_047G1_scaffold_175_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7050..7475
DNA (426bp) protein (142aa)
ACT domain protein n=8 Tax=Bacteroidales RepID=C7XAZ3_9PORP
ACT domain protein {ECO:0000313|EMBL:EEU51420.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
acetohydroxyacid synthase small subunit
L3_098_047G1_scaffold_175_10
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7489..7632
DNA (144bp) protein (48aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7XAZ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51419.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_098_047G1_scaffold_175_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7629..9182
DNA (1554bp) protein (518aa)
Transporter, SSS family n=2 Tax=Bacteroidales RepID=C7XAZ1_9PORP
Sodium:proline symporter (Proline permease) {ECO:0000313|EMBL:EFI08181.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
osmo-regulated proline transporter
L3_098_047G1_scaffold_175_12
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9353..10261
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TBB9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY84532.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_098_047G1_scaffold_175_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10258..11616
DNA (1359bp) protein (453aa)
ABC transporter, ATP-binding protein n=2 Tax=Parabacteroides RepID=E1YV47_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20714.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
ABC transporter
L3_098_047G1_scaffold_175_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11639..13147)
DNA (1509bp) protein (503aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K5Z8U6_9PORP
two-component system sensor histidine kinase
L3_098_047G1_scaffold_175_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13300..15426
DNA (2127bp) protein (709aa)
Putative RNA binding protein with S1 RNA-binding domain n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LBR6_PARD8
Putative RNA binding protein with S1 RNA-binding domain {ECO:0000313|EMBL:ABR43130.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
RNA-binding protein
L3_098_047G1_scaffold_175_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15430..15912
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=9 Tax=Bacteroidales RepID=A6LBR7_PARD8
transcriptional regulator
L3_098_047G1_scaffold_175_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16037..16441)
DNA (405bp) protein (135aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7XAY5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51412.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_098_047G1_scaffold_175_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16601..17182
DNA (582bp) protein (194aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LBR9_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU51411.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_098_047G1_scaffold_175_19
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17278..18114
DNA (837bp) protein (279aa)
Transcriptional regulator, AraC family n=4 Tax=Bacteroidales RepID=D0TBB2_9BACE
AraC-type transcription regulator {ECO:0000313|EMBL:CDB47809.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
transcriptional regulator
L3_098_047G1_scaffold_175_20
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18390..19235
DNA (846bp) protein (282aa)
Prephenate dehydratase n=2 Tax=Bacteroidales RepID=D0TBB1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN28575.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
prephenate dehydratase
L3_098_047G1_scaffold_175_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19210..20388
DNA (1179bp) protein (393aa)
Aminotransferase, classes I and II n=2 Tax=Bacteroidales RepID=D7ITM1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN28576.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
aminotransferase
L3_098_047G1_scaffold_175_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20423..21493
DNA (1071bp) protein (357aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase n=5 Tax=Bacteroidales RepID=D7ITM0_9BACE
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EKN20705.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
phospho-2-dehydro-3-deoxyheptonate aldolase
L3_098_047G1_scaffold_175_23
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21502..22275
DNA (774bp) protein (258aa)
Chorismate mutase/prephenate dehydratase n=4 Tax=Bacteroidales RepID=D7ITL9_9BACE
Putative prephenate dehydrogenase {ECO:0000313|EMBL:EEY84521.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
chorismate mutase/prephenate dehydratase
L3_098_047G1_scaffold_175_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22298..23677)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5Z8T4_9PORP
MatE family protein {ECO:0000313|EMBL:KDS66334.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
transmembrane cation efflux pump
L3_098_047G1_scaffold_175_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23763..24320)
DNA (558bp) protein (186aa)
Cyclic nucleotide-binding domain protein n=3 Tax=Parabacteroides RepID=E1YV35_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20702.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
cAMP-binding domain-containing protein
L3_098_047G1_scaffold_175_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24646..25992
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AXN2_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EKN28581.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
multidrug efflux transport protein
L3_098_047G1_scaffold_175_27
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25998..27395)
DNA (1398bp) protein (466aa)
Transporter, major facilitator family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TBA4_9BACE
transporter
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEY84517.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_098_047G1_scaffold_175_28
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27482..28831
DNA (1350bp) protein (450aa)
Putative fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TBA3_9BACE
Putative fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein {ECO:0000313|EMBL:EEY84516.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
two-component system response regulator
L3_098_047G1_scaffold_175_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28821..30140
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=5 Tax=root RepID=C7XAX3_9PORP
two-component system sensor histidine kinase
L3_098_047G1_scaffold_175_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30313..31566
DNA (1254bp) protein (418aa)
Mn2+ and Fe2+ transport protein n=2 Tax=Bacteroidales RepID=A6LBT1_PARD8
Mn2+ and Fe2+ transport protein
Mn2+ and Fe2+ transport protein {ECO:0000313|EMBL:ABR43145.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Displaying items 1-30 of 46 in total

View Taxonomy