ggKbase home page

L3_098_047G1_scaffold_180

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_180_1
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(445..1119)
DNA (675bp) protein (225aa)
ABC transporter, ATP-binding protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWV9_9BACL
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EER68330.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
pyridoxamine 5'-phosphate oxidase protein
L3_098_047G1_scaffold_180_2
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1127..2203)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A291_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF88645.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
permease
L3_098_047G1_scaffold_180_3
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2793..3980)
DNA (1188bp) protein (396aa)
Elongation factor Tu n=3 Tax=Gemella RepID=C5NWV5_9BACL
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
tufA; elongation factor Tu
L3_098_047G1_scaffold_180_4
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4104..6179)
DNA (2076bp) protein (692aa)
Elongation factor G n=1 Tax=Gemella haemolysans M341 RepID=F3A295_9BACL
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
fusA; elongation factor P
L3_098_047G1_scaffold_180_5
Gemella morbillorum, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(6281..6751)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=3 Tax=Gemella RepID=C5NWV3_9BACL
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=562982 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella morbillorum M424.;"
rpsG; 30S ribosomal protein S7
L3_098_047G1_scaffold_180_6
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(6800..7219)
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=3 Tax=Gemella RepID=C5NWV2_9BACL
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
30S ribosomal protein S12
L3_098_047G1_scaffold_180_7
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7630..8373
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A298_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF88652.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
ABC transporter ATP-binding protein
L3_098_047G1_scaffold_180_8
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8376..9977
DNA (1602bp) protein (534aa)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A299_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF88653.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
hypothetical protein
L3_098_047G1_scaffold_180_9
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10035..11372)
DNA (1338bp) protein (446aa)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A2A0_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF88654.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
hemerythrin HHE cation binding domain subfamily
L3_098_047G1_scaffold_180_10
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11372..11605)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWU1_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EER68289.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
hypothetical protein
L3_098_047G1_scaffold_180_11
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11783..12397)
DNA (615bp) protein (205aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWU0_9BACL
L3_098_047G1_scaffold_180_12
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12432..13130)
DNA (699bp) protein (233aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWT9_9BACL
orotidine 5'-phosphate decarboxylase
L3_098_047G1_scaffold_180_13
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13145..14059)
DNA (915bp) protein (305aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Dihydroorotate dehydrogenase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWT8_9BACL
dihydroorotate dehydrogenase
L3_098_047G1_scaffold_180_14
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14069..14833)
DNA (765bp) protein (255aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Gemella haemolysans M341 RepID=F3A2A5_9BACL
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
dihydroorotate dehydrogenase electron transfer subunit
L3_098_047G1_scaffold_180_15
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14891..18067)
DNA (3177bp) protein (1059aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWT6_9BACL
carB; carbamoyl phosphate synthase large subunit
L3_098_047G1_scaffold_180_16
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18120..19208)
DNA (1089bp) protein (363aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWT5_9BACL
carbamoyl phosphate synthase small subunit
L3_098_047G1_scaffold_180_17
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19241..20521)
DNA (1281bp) protein (427aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
Dihydroorotase n=1 Tax=Gemella haemolysans M341 RepID=F3A2A8_9BACL
dihydroorotase
L3_098_047G1_scaffold_180_18
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20535..21416)
DNA (882bp) protein (294aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
Aspartate carbamoyltransferase n=1 Tax=Gemella haemolysans M341 RepID=F3A2A9_9BACL
aspartate carbamoyltransferase
L3_098_047G1_scaffold_180_19
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21611..22135)
DNA (525bp) protein (175aa)
Bifunctional protein PyrR n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWT2_9BACL
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
pyrR; uracil phosphoribosyltransferase
L3_098_047G1_scaffold_180_20
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22679..23722)
DNA (1044bp) protein (348aa)
Fic/DOC family protein n=1 Tax=Streptococcus mitis SK1080 RepID=F9HL27_STRMT
Fic/DOC family protein {ECO:0000313|EMBL:EGP69964.1}; TaxID=1008453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis SK1080.;"
hypothetical protein
L3_098_047G1_scaffold_180_21
unknown

Not on your lists

comp(23879..23974)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_098_047G1_scaffold_180_22
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24010..25365)
DNA (1356bp) protein (452aa)
ABC transporter, ATP-binding protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWT1_9BACL
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EER68329.1}; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
ABC transporter ATP-binding protein
L3_098_047G1_scaffold_180_23
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25573..26730
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A2B2_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF88666.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
amidohydrolase
L3_098_047G1_scaffold_180_24
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26733..27014
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A2B3_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF88667.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
L3_098_047G1_scaffold_180_25
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27048..29897)
DNA (2850bp) protein (950aa)
Ig domain protein (Fragment) n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2P7A3_9FIRM
Ig domain protein {ECO:0000313|EMBL:ERK46380.1}; Flags: Fragment;; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
roundabout, axon guidance receptor 3
L3_098_047G1_scaffold_180_26
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30057..30665)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A2B4_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF88668.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
hypothetical protein
L3_098_047G1_scaffold_180_27
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30684..32039)
DNA (1356bp) protein (452aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EER68356.1}; EC=2.1.1.- {ECO:0000313|EMBL:EER68356.1};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWS7_9BACL
TrmA family RNA methyltransferase
L3_098_047G1_scaffold_180_28
Gemella morbillorum, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32111..32266)
DNA (156bp) protein (52aa)
Uncharacterized protein n=3 Tax=Gemella RepID=C5NWS6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EFV35887.1}; TaxID=562982 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella morbillorum M424.;"
hypothetical protein
L3_098_047G1_scaffold_180_29
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32509..34026
DNA (1518bp) protein (506aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
Cardiolipin synthase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWS5_9BACL
hypothetical protein
L3_098_047G1_scaffold_180_30
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34092..35030
DNA (939bp) protein (313aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=546270 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans ATCC 10379.;"
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
PPIC-type PPIASE domain protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWS4_9BACL
Displaying items 1-30 of 58 in total

View Taxonomy