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L3_098_047G1_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_183_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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198..632
DNA (435bp) protein (145aa)
Transposase DDE domain n=2 Tax=Eubacterium rectale RepID=D6E3L6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76669.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_047G1_scaffold_183_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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870..1127
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UL88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC71522.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
hypothetical protein
L3_098_047G1_scaffold_183_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1300..2355
DNA (1056bp) protein (352aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
D-alanine--D-alanine ligase n=2 Tax=Eubacterium rectale RepID=C4ZI29_EUBR3
L3_098_047G1_scaffold_183_4
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2357..3751
DNA (1395bp) protein (465aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TH10_9FIRM
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
L3_098_047G1_scaffold_183_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3857..4378
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CBK90009.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Eubacterium RepID=C4ZI27_EUBR3
L3_098_047G1_scaffold_183_6
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4378..5433
DNA (1056bp) protein (352aa)
Acetyltransferases including N-acetylases of ribosomal proteins n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TDP7_9FIRM
Acetyltransferases including N-acetylases of ribosomal proteins {ECO:0000313|EMBL:CDC71508.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Acetyltransferases, including N-acetylases of ribosomal proteins
L3_098_047G1_scaffold_183_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5493..6437
DNA (945bp) protein (315aa)
Transcriptional regulator/sugar kinase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZI24_EUBR3
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:ACR76661.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_047G1_scaffold_183_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6513..8864
DNA (2352bp) protein (784aa)
(P)ppGpp synthetase I, SpoT/RelA n=2 Tax=Eubacterium RepID=C4ZI23_EUBR3
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ACR76660.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
(p)ppGpp synthetase I, SpoT/RelA
L3_098_047G1_scaffold_183_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8920..9549
DNA (630bp) protein (210aa)
Hydroxyacylglutathione hydrolase n=2 Tax=Eubacterium rectale RepID=C4ZI22_EUBR3
hydroxyacylglutathione hydrolase
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:ACR76659.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_098_047G1_scaffold_183_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9546..11144
DNA (1599bp) protein (533aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases {ECO:0000313|EMBL:CBK90013.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CBK90013.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3M3_9FIRM
L3_098_047G1_scaffold_183_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11432..12880
DNA (1449bp) protein (483aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CBK90016.1}; EC=2.7.8.6 {ECO:0000313|EMBL:CBK90016.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E3M6_9FIRM
L3_098_047G1_scaffold_183_12
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12957..13427
DNA (471bp) protein (157aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6L8E9_9FIRM
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase {ECO:0000313|EMBL:CDB79799.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
L3_098_047G1_scaffold_183_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14150..15823
DNA (1674bp) protein (558aa)
Phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:CBL18904.1}; EC=5.4.2.8 {ECO:0000313|EMBL:CBL18904.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Phosphomannomutase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LGE3_9FIRM
L3_098_047G1_scaffold_183_14
Enterococcus columbae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15843..17153
DNA (1311bp) protein (437aa)
Mannose-1-phosphate guanylyltransferase (EC:5.3.1.8)
Uncharacterized protein n=1 Tax=Enterococcus columbae DSM 7374 = ATCC 51263 RepID=S0KHQ4_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOW80241.1}; TaxID=1121865 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus columbae DSM 7374 = ATCC 51263.;"
L3_098_047G1_scaffold_183_15
Enterococcus columbae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17175..18140
DNA (966bp) protein (322aa)
mannose-6-phosphate isomerase, class I (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Enterococcus columbae DSM 7374 = ATCC 51263 RepID=S1MU66_9ENTE
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EOW80240.1}; TaxID=1121865 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus columbae DSM 7374 = ATCC 51263.;"
L3_098_047G1_scaffold_183_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18166..18906
DNA (741bp) protein (247aa)
N-acetylmannosaminyltransferase (EC:2.4.1.187)
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CIU8_9CLOT
Glycosyltransferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ERI69162.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
L3_098_047G1_scaffold_183_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18928..20025
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YT81_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30806.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Glycosyltransferase
L3_098_047G1_scaffold_183_18
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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20051..20623
DNA (573bp) protein (191aa)
Serine acetyltransferase n=1 Tax=Streptococcus suis RepID=G8DUB8_STRSU
Cps25K {ECO:0000313|EMBL:AEH57619.1}; Serine acetyltransferase {ECO:0000313|EMBL:FAA01093.1}; TaxID=1307 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis.;"
serine acetyltransferase
L3_098_047G1_scaffold_183_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20581..21756
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BBN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69203.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_098_047G1_scaffold_183_20
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21779..22756
DNA (978bp) protein (326aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CJ07_9CLOT
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI69202.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
glycosyl transferase family protein
L3_098_047G1_scaffold_183_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22756..23928
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CPI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69201.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
O-antigen polymerase
L3_098_047G1_scaffold_183_22
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23915..24856
DNA (942bp) protein (314aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BAK3_9CLOT
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI69200.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative glycosyltransferase
L3_098_047G1_scaffold_183_23
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24859..26025
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ATQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69199.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
polysaccharide pyruvyl transferase
L3_098_047G1_scaffold_183_24
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26047..27597
DNA (1551bp) protein (517aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BBM5_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ERI69198.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_098_047G1_scaffold_183_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27609..28829
DNA (1221bp) protein (407aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CJ02_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERI69197.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
coenzyme F420-reducing hydrogenase subunit beta
L3_098_047G1_scaffold_183_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28847..29935
DNA (1089bp) protein (363aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CPH9_9CLOT
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI69196.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Glycosyltransferases involved in cell wall biogenesis
L3_098_047G1_scaffold_183_27
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29965..31083
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BAJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69195.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
polysaccharide pyruvyl transferase
L3_098_047G1_scaffold_183_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31104..32006
DNA (903bp) protein (301aa)
dTDP-glucose pyrophosphorylase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5F3_9FIRM
dTDP-glucose pyrophosphorylase
dTDP-glucose pyrophosphorylase {ECO:0000313|EMBL:CBL26465.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_098_047G1_scaffold_183_29
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32087..32320
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D657_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53191.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_098_047G1_scaffold_183_30
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32317..32496
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D656_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53190.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Displaying items 1-30 of 47 in total

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