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L3_098_047G1_scaffold_345

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_345_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1..120)
DNA (120bp) protein (40aa)
deoC2; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
Deoxyribose-phosphate aldolase n=5 Tax=Staphylococcus aureus RepID=D8HDB0_STAAF
L3_098_047G1_scaffold_345_2
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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435..1145
DNA (711bp) protein (237aa)
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQG6_STAAU
L3_098_047G1_scaffold_345_3
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1266..1709)
DNA (444bp) protein (148aa)
Ferritin, Dps family protein n=377 Tax=Staphylococcus aureus RepID=A5IUT4_STAA9
hypothetical protein
Non-specific DNA-binding protein Dps {ECO:0000313|EMBL:BAR09627.1}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
L3_098_047G1_scaffold_345_4
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1909..2322)
DNA (414bp) protein (138aa)
Thiol-disulphide oxidoreductase, DCC family protein n=312 Tax=Staphylococcus aureus RepID=A6QIY4_STAAE
Thiol-disulfide oxidoreductase, DCC family protein
Putative thiol-disulfide oxidoreductase%2C DCC family {ECO:0000313|EMBL:CRE84992.1}; Thiol-disulfide oxidoreductase {ECO:0000313|EMBL:CKH23045.1}; Uncharacterized protein {ECO:0000313|EMBL:AIL58645.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_098_047G1_scaffold_345_5
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2779..4152)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=87 Tax=Staphylococcus aureus RepID=C5N2J4_STAA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFH95633.1}; TaxID=548470 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus MN8.;"
L3_098_047G1_scaffold_345_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4824..5054)
DNA (231bp) protein (77aa)
Uncharacterized protein n=368 Tax=Staphylococcus aureus RepID=A5IUT7_STAA9
hypothetical protein
Strain SA-120 Contig624, whole genome shotgun sequence {ECO:0000313|EMBL:KIT97215.1}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
L3_098_047G1_scaffold_345_7
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5085..6101)
DNA (1017bp) protein (339aa)
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:AFH70374.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AFH70374.1};; TaxID=1155084 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus 71193.;"
Mannose-6-phosphate isomerase n=342 Tax=Staphylococcus aureus RepID=I0C6E5_STAA5
mannose-6-phosphate isomerase
L3_098_047G1_scaffold_345_8
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6459..7124)
DNA (666bp) protein (222aa)
NAD-dependent epimerase/dehydratase n=257 Tax=Staphylococcus aureus RepID=A5IUT9_STAA9
ylbE; oxidoreductase ylbE
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EES93986.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_098_047G1_scaffold_345_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7276..7596
DNA (321bp) protein (107aa)
Transcriptional regulator, ArsR family n=402 Tax=Staphylococcus aureus RepID=A5IUU0_STAA9
czrA; zinc and cobalt transport repressor protein
Zn(II) or Co(II)-specific transcriptional repressor protein {ECO:0000313|EMBL:AGY90349.1}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
L3_098_047G1_scaffold_345_10
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7598..8578
DNA (981bp) protein (327aa)
Zinc resistance protein n=13 Tax=Staphylococcus aureus RepID=Q6G7G4_STAAS
Cobalt-zinc-cadmium resistance protein czcD
Cobalt-zinc-cadmium resistance protein czcD {ECO:0000313|EMBL:AGU62254.1}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
L3_098_047G1_scaffold_345_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8844..9935
DNA (1092bp) protein (364aa)
Uncharacterized protein n=6 Tax=Staphylococcus aureus RepID=C5PZ65_STAAU
Lytic regulatory protein
Lytic regulatory protein {ECO:0000313|EMBL:AGU62255.1}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
L3_098_047G1_scaffold_345_12
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10998..11168
DNA (171bp) protein (57aa)
Uncharacterized protein n=55 Tax=Staphylococcus aureus RepID=A7X510_STAA1
transposase
Transposase {ECO:0000313|EMBL:AGU62256.1}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
L3_098_047G1_scaffold_345_13
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11161..11319
DNA (159bp) protein (53aa)
Uncharacterized protein n=94 Tax=Staphylococcus aureus RepID=A7X511_STAA1
transposase for insertion sequence element
Uncharacterized protein {ECO:0000313|EMBL:EFH95624.1}; TaxID=548470 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus MN8.;"
L3_098_047G1_scaffold_345_14
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11977..12834)
DNA (858bp) protein (286aa)
Cof-like hydrolase n=2 Tax=Staphylococcus aureus RepID=H0CQH8_STAAU
Putative cytosolic protein
Putative cytosolic protein {ECO:0000313|EMBL:AGU62259.1}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
L3_098_047G1_scaffold_345_15
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12902..13684)
DNA (783bp) protein (261aa)
ABC transporter, ATP-binding protein n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQH9_STAAU
hypothetical protein
FecE {ECO:0000313|EMBL:AFH70383.1}; TaxID=1155084 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus 71193.;"
L3_098_047G1_scaffold_345_16
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13916..15739)
DNA (1824bp) protein (608aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Staphylococcus aureus subsp. aureus ST228 RepID=K0M6V6_STAAU
glmS; Glucosamine--fructose-6-phosphate aminotransferas e
L3_098_047G1_scaffold_345_17
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16402..17940
DNA (1539bp) protein (513aa)
EIICBA-Mtl n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQI1_STAAU
Mannitol-specific phosphotransferase enzyme IIB component
PTS system, mannitol-specific IIBC component {ECO:0000313|EMBL:BAR12367.1}; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
L3_098_047G1_scaffold_345_18
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17975..20107
DNA (2133bp) protein (711aa)
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2 n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQI2_STAAU
PRD domain-containing protein
Mannitol operon activator, BglG family {ECO:0000313|EMBL:AGY90358.1}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
L3_098_047G1_scaffold_345_19
Staphylococcus argenteus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20119..20553
DNA (435bp) protein (145aa)
PTS system, mannitol-specific IIA component {ECO:0000313|EMBL:CCE59819.1}; EC=2.7.1.- {ECO:0000313|EMBL:CCE59819.1};; TaxID=985002 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus argenteus.;"
Mannitol-specific phosphotransferase enzyme IIA component n=356 Tax=Staphylococcus aureus RepID=PTMA_STAAC
PTS system, mannitol-specific IIA component
L3_098_047G1_scaffold_345_20
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20553..21659
DNA (1107bp) protein (369aa)
mtlD; Mannitol-1-phosphate=5-dehydrogenase (EC:1.1.1.17)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00196}; EC=1.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00196};; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
Mannitol-1-phosphate 5-dehydrogenase n=249 Tax=Staphylococcus aureus RepID=MTLD_STAA1
L3_098_047G1_scaffold_345_21
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21978..29474)
DNA (7497bp) protein (2499aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQI5_STAAU
Putative DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:EES93971.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
Extracellular matrix binding protein
L3_098_047G1_scaffold_345_22
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29751..31106)
DNA (1356bp) protein (452aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000255|HAMAP-Rule:MF_01554}; EC=5.4.2.10 {ECO:0000255|HAMAP-Rule:MF_01554};; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
Phosphoglucosamine mutase n=338 Tax=Staphylococcus aureus RepID=GLMM_STAA1
L3_098_047G1_scaffold_345_23
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31133..32065)
DNA (933bp) protein (311aa)
YbbR family protein n=345 Tax=Staphylococcus aureus RepID=A5IUV2_STAA9
hypothetical protein
YbbR-like protein {ECO:0000313|EMBL:EES93969.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_098_047G1_scaffold_345_24
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32067..32876)
DNA (810bp) protein (270aa)
Uncharacterized protein n=387 Tax=Staphylococcus aureus RepID=A5IUV3_STAA9
Hypothetical protein YbbP, contains nucleotide-binding domain of DisA bacterial checkpoint controller
Putative uncharacterized protein {ECO:0000313|EMBL:ABD31436.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_098_047G1_scaffold_345_25
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33065..33973)
DNA (909bp) protein (303aa)
rocF; arginase (EC:3.5.3.1)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=46170 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus.;"
Arginase n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQI9_STAAU
Displaying 25 items

View Taxonomy