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L3_098_047G1_scaffold_362

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_362_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2018..3079
DNA (1062bp) protein (354aa)
Phosphotransferase system, EIIC n=317 Tax=Staphylococcus aureus RepID=A5IU25_STAA9
pfoS_R; Regulatory protein
Phosphotransferase system, EIIC domain protein {ECO:0000313|EMBL:ABD31051.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_098_047G1_scaffold_362_2
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3337..4794
DNA (1458bp) protein (486aa)
Polar amino acid ABC transporter, inner membrane subunit n=254 Tax=Staphylococcus aureus RepID=A5IU24_STAA9
putative extracellular glutamine-binding protein
Extracellular glutamine-binding protein {ECO:0000313|EMBL:CEK44891.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
L3_098_047G1_scaffold_362_3
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4781..5509
DNA (729bp) protein (243aa)
ABC transporter related n=362 Tax=Staphylococcus aureus RepID=A5IU23_STAA9
glutamate transport ATP-binding protein
Glutamate transport ATP-binding protein {ECO:0000313|EMBL:AGY89968.1}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
L3_098_047G1_scaffold_362_4
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5645..6787
DNA (1143bp) protein (381aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=548470 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus MN8.;"
Epoxyqueuosine reductase n=1 Tax=Staphylococcus aureus subsp. aureus 103564 RepID=R9D1F9_STAAU
putative iron-sulfur cluster-binding protein
L3_098_047G1_scaffold_362_5
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6792..7262
DNA (471bp) protein (157aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
tRNA (Cytidine(34)-2'-O)-methyltransferase n=173 Tax=Staphylococcus aureus RepID=V8B5A4_STAAU
SpoU rRNA methylase family protein
L3_098_047G1_scaffold_362_6
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7421..8020
DNA (600bp) protein (200aa)
Glucosamine-6-phosphate isomerase family protein n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQ21_STAAU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ABD31046.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_098_047G1_scaffold_362_7
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8045..8197
DNA (153bp) protein (51aa)
Uncharacterized protein n=395 Tax=Staphylococcus aureus RepID=I0C5K2_STAA5
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ABD31045.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_098_047G1_scaffold_362_8
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8889..9311
DNA (423bp) protein (141aa)
Uncharacterized protein n=278 Tax=Staphylococcus aureus RepID=C5N6T2_STAA3
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AGU61948.1}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
L3_098_047G1_scaffold_362_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9507..10892
DNA (1386bp) protein (462aa)
fumC; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000255|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000255|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000255|HAMAP-Rule:MF_00743};; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
Fumarate hydratase class II n=17 Tax=Staphylococcus aureus RepID=FUMC_STAAS
L3_098_047G1_scaffold_362_10
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11344..12165)
DNA (822bp) protein (274aa)
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:AGU61946.1}; EC=4.2.1.70 {ECO:0000313|EMBL:AGU61946.1};; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
Pseudouridine synthase n=322 Tax=Staphylococcus aureus RepID=A5IU16_STAA9
ribosomal large subunit pseudouridine synthase D
L3_098_047G1_scaffold_362_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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12328..13440
DNA (1113bp) protein (371aa)
Histidine kinase n=6 Tax=Staphylococcus aureus RepID=C5N6S9_STAA3
Histidine kinase {ECO:0000313|EMBL:EES92516.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
GAF sensor signal transduction histidine kinase
L3_098_047G1_scaffold_362_12
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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13462..14085
DNA (624bp) protein (208aa)
Response regulator receiver domain protein n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQ15_STAAU
putative response regulator
DNA-binding response regulator, putative {ECO:0000313|EMBL:ABD31039.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_098_047G1_scaffold_362_13
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14441..14905
DNA (465bp) protein (155aa)
Transcriptional regulator, XRE family n=418 Tax=Staphylococcus aureus RepID=A5IU13_STAA9
HTH domain protein, binds to mecA promoter region
Putative uncharacterized protein {ECO:0000313|EMBL:ABD31038.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_098_047G1_scaffold_362_14
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15084..16208
DNA (1125bp) protein (375aa)
Uncharacterized protein n=7 Tax=Staphylococcus aureus RepID=C5N6S6_STAA3
Putative membrane associated protein
Putative membrane associated protein {ECO:0000313|EMBL:AGU61942.1}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
L3_098_047G1_scaffold_362_15
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16277..16621
DNA (345bp) protein (115aa)
UPF0342 protein SA1663 n=416 Tax=Staphylococcus aureus RepID=Y1663_STAAN
hypothetical protein with DUF964
UPF0342 protein SaurJH1_1932 {ECO:0000255|HAMAP-Rule:MF_01526}; TaxID=359787 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain JH1).;"
L3_098_047G1_scaffold_362_16
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17510..18706
DNA (1197bp) protein (399aa)
Ser/Thr phosphatase family protein n=2 Tax=Staphylococcus aureus RepID=H0CQ11_STAAU
hypothetical protein
DNA double-strand break repair protein Mre11 {ECO:0000313|EMBL:AGY89955.1}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
L3_098_047G1_scaffold_362_17
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18696..21632
DNA (2937bp) protein (979aa)
Uncharacterized protein n=61 Tax=Staphylococcus aureus RepID=A8YY12_STAAT
DNA double-strand break repair ATPase
DNA double-strand break repair Rad50 ATPase {ECO:0000313|EMBL:AGY89954.1}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
L3_098_047G1_scaffold_362_18
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21629..22570
DNA (942bp) protein (314aa)
3'-5' exoribonuclease YhaM (EC:3.1.-.-)
Metal dependent phosphohydrolase n=389 Tax=Staphylococcus aureus RepID=A5IU07_STAA9
HDIG domain protein {ECO:0000313|EMBL:EES92508.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_098_047G1_scaffold_362_19
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22691..23653)
DNA (963bp) protein (321aa)
PPIC-type PPIASE domain-containing protein (EC:5.2.1.8)
Foldase protein PrsA {ECO:0000255|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_01145};; Flags: Precursor;; TaxID=282459 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MSSA476).;"
Foldase protein PrsA n=316 Tax=Staphylococcus aureus RepID=PRSA_STAA1
L3_098_047G1_scaffold_362_20
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23858..24415)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQ07_STAAU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES92506.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_098_047G1_scaffold_362_21
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25148..25513)
DNA (366bp) protein (122aa)
Gas vesicle protein-like protein n=409 Tax=Staphylococcus aureus RepID=A5IU04_STAA9
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ABD31029.1}; TaxID=93061 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain NCTC 8325).;"
L3_098_047G1_scaffold_362_22
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(25655..26077)
DNA (423bp) protein (141aa)
Protein hit n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQ05_STAAU
HIT-family protein
Histidine triad domain protein {ECO:0000313|EMBL:EES92504.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_098_047G1_scaffold_362_23
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26211..26951
DNA (741bp) protein (247aa)
ABC superfamily ATP binding cassette transporter, ABC protein (EC:3.6.3.-)
EcsA n=261 Tax=Staphylococcus aureus RepID=I0C5I3_STAA5
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH94221.1}; TaxID=548470 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus MN8.;"
L3_098_047G1_scaffold_362_24
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26944..28167
DNA (1224bp) protein (408aa)
Bacterial ABC transporter protein EcsB n=1 Tax=Staphylococcus aureus subsp. aureus 21334 RepID=H0CQ03_STAAU
bacterial ABC transporter EcsB family protein
Bacterial ABC transporter protein EcsB {ECO:0000313|EMBL:EES92502.1}; TaxID=450394 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus USA300_TCH959.;"
L3_098_047G1_scaffold_362_25
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28291..28794)
DNA (504bp) protein (168aa)
Signal transduction protein TRAP n=20 Tax=Staphylococcus aureus RepID=TRAP_STAAS
signal transduction protein TRAP
Signal transduction protein TRAP; Target of RNAIII-activating protein; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
L3_098_047G1_scaffold_362_26
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29057..30094
DNA (1038bp) protein (346aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000255|HAMAP-Rule:MF_00218}; Short=UPD {ECO:0000255|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000255|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000255|HAMAP-Rule:MF_00218};; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
Uroporphyrinogen decarboxylase n=330 Tax=Staphylococcus aureus RepID=DCUP_STAA1
L3_098_047G1_scaffold_362_27
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30152..31075
DNA (924bp) protein (308aa)
hemH; Ferrochelatase, protoheme ferro-lyase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Ferrochelatase n=329 Tax=Staphylococcus aureus RepID=HEMH_STAAC
L3_098_047G1_scaffold_362_28
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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31099..32499
DNA (1401bp) protein (467aa)
Protoporphyrinogen IX dehydrogenase [menaquinone] (EC:1.3.3.4 1.3.5.3)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:AGU61924.1}; EC=1.3.3.4 {ECO:0000313|EMBL:AGU61924.1};; EC=1.3.5.3 {ECO:0000313|EMBL:AGU61924.1};; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
Protoporphyrinogen oxidase n=5 Tax=Staphylococcus aureus subsp. aureus RepID=F3THF1_STAAU
L3_098_047G1_scaffold_362_29
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32820..33374
DNA (555bp) protein (185aa)
Uncharacterized protein n=355 Tax=Bacilli RepID=A6QI12_STAAE
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY89942.1}; TaxID=1406863 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus Z172.;"
L3_098_047G1_scaffold_362_30
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34605..35369
DNA (765bp) protein (255aa)
Toxin, beta-grasp domain protein n=6 Tax=Staphylococcus aureus subsp. aureus RepID=C5Q5N8_STAAU
Enterotoxin
Enterotoxin {ECO:0000313|EMBL:AGU61921.1}; TaxID=1193576 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CN1.;"
Displaying items 1-30 of 45 in total

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