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L3_098_047G1_scaffold_363

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_363_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(175..687)
DNA (513bp) protein (171aa)
Uncharacterized protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HLS0_STAEQ
Hypothetical protein SAV2325
Uncharacterized protein {ECO:0000313|EMBL:AAW55247.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_047G1_scaffold_363_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(984..2285)
DNA (1302bp) protein (434aa)
Na+/H+ antiporter, putative n=54 Tax=Staphylococcus epidermidis RepID=Q5HLR9_STAEQ
Methionine transporter MetT
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EFE59140.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2591..3178)
DNA (588bp) protein (196aa)
Uncharacterized protein n=28 Tax=Staphylococcus epidermidis RepID=Q5HLR8_STAEQ
Hypothetical protein SAV2327
Uncharacterized protein {ECO:0000313|EMBL:AAW55249.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_047G1_scaffold_363_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3222..3833)
DNA (612bp) protein (204aa)
Uncharacterized protein n=36 Tax=Staphylococcus epidermidis RepID=Q5HLR7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW55250.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_047G1_scaffold_363_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4120..5001)
DNA (882bp) protein (294aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=36 Tax=Staphylococcus epidermidis RepID=Q5HLR6_STAEQ
Dehydrogenase
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:AAW55251.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_047G1_scaffold_363_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5098..6216)
DNA (1119bp) protein (373aa)
N-acetyl-L,L-diaminopimelate deacetylase homolog (EC:3.5.1.18)
Amidohydrolase family protein n=27 Tax=Staphylococcus epidermidis RepID=Q5HLR5_STAEQ
Amidohydrolase {ECO:0000313|EMBL:EFE59144.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6686..7621)
DNA (936bp) protein (312aa)
hutG; formimidoylglutamase (EC:3.5.3.8)
Formimidoylglutamase {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446}; EC=3.5.3.8 {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446};; Formiminoglutamase {ECO:0000256|HAMAP-Rule:MF_00737}; Formiminoglutamate hydrolase {ECO:0000256|HAMAP-Rule:MF_00737}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Formimidoylglutamase n=45 Tax=Staphylococcus epidermidis RepID=HUTG_STAEQ
L3_098_047G1_scaffold_363_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7869..9017
DNA (1149bp) protein (383aa)
Lysostaphin resistance protein A n=41 Tax=Staphylococcus epidermidis RepID=LYRA_STAEQ
hypothetical protein
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFE59146.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9579..9764
DNA (186bp) protein (62aa)
Uncharacterized protein n=20 Tax=Staphylococcus epidermidis RepID=Q5HLR0_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59148.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_10
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10003..10695)
DNA (693bp) protein (231aa)
Ribose 5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Ribose-5-phosphate isomerase A n=50 Tax=Staphylococcus epidermidis RepID=RPIA_STAEQ
L3_098_047G1_scaffold_363_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10861..11541
DNA (681bp) protein (227aa)
Uncharacterized protein n=46 Tax=Staphylococcus epidermidis RepID=Q5HLQ8_STAEQ
Uncharacterized protein conserved in bacteria
Uncharacterized protein {ECO:0000313|EMBL:AAW55267.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_047G1_scaffold_363_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11614..12624)
DNA (1011bp) protein (337aa)
Aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000313|EMBL:AAW55268.1}; EC=5.1.3.3 {ECO:0000313|EMBL:AAW55268.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Aldose 1-epimerase n=49 Tax=Staphylococcus epidermidis RepID=Q5HLQ7_STAEQ
L3_098_047G1_scaffold_363_13
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13213..14823
DNA (1611bp) protein (537aa)
Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|SAAS:SAAS00183333};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
ribulokinase (EC:2.7.1.16)
Ribulokinase n=4 Tax=Staphylococcus epidermidis RepID=H3VYP7_STAEP
L3_098_047G1_scaffold_363_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15048..15521)
DNA (474bp) protein (158aa)
Uncharacterized protein n=39 Tax=Staphylococcus epidermidis RepID=Q8CRC3_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59153.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_15
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15826..16434
DNA (609bp) protein (203aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Putative 3-methyladenine DNA glycosylase n=45 Tax=Staphylococcus epidermidis RepID=D1WKM9_STAEP
L3_098_047G1_scaffold_363_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16589..17392)
DNA (804bp) protein (268aa)
Uncharacterized protein n=3 Tax=Staphylococcus epidermidis RepID=H3VYV4_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59155.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17389..17949)
DNA (561bp) protein (187aa)
PF08006 family protein n=4 Tax=Staphylococcus epidermidis RepID=H3VYV5_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59156.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17946..18266)
DNA (321bp) protein (107aa)
Transcriptional regulator, PadR family n=6 Tax=Staphylococcus epidermidis RepID=H0DQY9_STAEP
transcriptional regulator PadR-like family protein
Transcriptional regulator, PadR family {ECO:0000313|EMBL:AAW55282.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_047G1_scaffold_363_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18575..19783
DNA (1209bp) protein (403aa)
Sodium:glutamate symporter n=49 Tax=Staphylococcus epidermidis RepID=Q5HLP9_STAEQ
gltS; sodium:glutamate symporter
Sodium:glutamate symporter {ECO:0000313|EMBL:AAW55283.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_047G1_scaffold_363_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19938..20987)
DNA (1050bp) protein (350aa)
Isopentenyl-diphosphate delta-isomerase,FMN-dependent (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Isopentenyl-diphosphate delta-isomerase n=43 Tax=Staphylococcus epidermidis RepID=IDI2_STAEQ
L3_098_047G1_scaffold_363_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21029..21976)
DNA (948bp) protein (316aa)
Magnesium and cobalt transport protein CorA n=11 Tax=Staphylococcus epidermidis RepID=Q5HLP7_STAEQ
corA; magnesium and cobalt transport protein CorA
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_047G1_scaffold_363_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22083..22559
DNA (477bp) protein (159aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM067 RepID=J0EQQ9_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EFE59161.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22562..22951
DNA (390bp) protein (130aa)
Uncharacterized protein n=7 Tax=Staphylococcus epidermidis RepID=H3VYW1_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59162.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23087..23986)
DNA (900bp) protein (300aa)
Esterase, putative n=35 Tax=Staphylococcus epidermidis RepID=Q5HLP4_STAEQ
putative esterase
Esterase, putative {ECO:0000313|EMBL:AAW52814.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
L3_098_047G1_scaffold_363_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24204..24836
DNA (633bp) protein (211aa)
Uncharacterized protein n=58 Tax=Bacteria RepID=Q5HLP3_STAEQ
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ESV20343.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
L3_098_047G1_scaffold_363_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25016..26992)
DNA (1977bp) protein (659aa)
Drug resistance MFS transporter, drug:H+ antiporter-2 family n=15 Tax=Staphylococcus epidermidis RepID=D4FKC7_STAEP
drug resistance MFS transporter, drug:H+ antiporter-2 family protein
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EFE59165.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27005..27652)
DNA (648bp) protein (216aa)
Drug transporter, putative n=72 Tax=Staphylococcus epidermidis RepID=Q5HLP0_STAEQ
Multidrug resistance protein [function not yet clear]
Uncharacterized protein {ECO:0000313|EMBL:EES34998.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
L3_098_047G1_scaffold_363_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27793..28344
DNA (552bp) protein (184aa)
Transcriptional regulator, TetR family n=1 Tax=Staphylococcus epidermidis SK135 RepID=D1WKL4_STAEP
TetR family regulatory protein of MDR cluster
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFE59167.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
L3_098_047G1_scaffold_363_29
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28381..29592)
DNA (1212bp) protein (404aa)
TcaB protein n=30 Tax=Staphylococcus epidermidis RepID=Q5HLN8_STAEQ
Teicoplanin resistance associated membrane protein TcaB
Drug resistance transporter, Bcr/CflA family protein {ECO:0000313|EMBL:ETJ13423.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
L3_098_047G1_scaffold_363_30
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29650..31056)
DNA (1407bp) protein (469aa)
Membrane-associated protein n=20 Tax=Staphylococcus epidermidis RepID=D4FKD1_STAEP
Membrane-associated protein {ECO:0000256|PIRNR:PIRNR032522}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Teicoplanin resistance associated membrane protein TcaA
Displaying items 1-30 of 32 in total

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