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L3_098_047G1_scaffold_1112

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_1112_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(54..2378)
DNA (2325bp) protein (775aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L3G9_BACV8
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR40233.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_098_047G1_scaffold_1112_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2652..3098)
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05499.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_047G1_scaffold_1112_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3110..3487)
DNA (378bp) protein (126aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C3PZH4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05500.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_047G1_scaffold_1112_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3532..4083)
DNA (552bp) protein (184aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HNY5_BACVU
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS05501.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
RNA polymerase sigma70 factor
L3_098_047G1_scaffold_1112_5
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4117..4944)
DNA (828bp) protein (276aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
Ribonuclease Z n=14 Tax=root RepID=B6W2P0_9BACE
ribonuclease Z
L3_098_047G1_scaffold_1112_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5117..5563)
DNA (447bp) protein (149aa)
Cold-shock DNA-binding domain protein n=7 Tax=Bacteroides RepID=C6Z644_9BACE
cold shock protein, DNA-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05503.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_047G1_scaffold_1112_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5813..7609)
DNA (1797bp) protein (599aa)
30S ribosomal protein S1 n=6 Tax=Bacteroides RepID=A6L3H5_BACV8
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:AII62724.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_098_047G1_scaffold_1112_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7643..7780)
DNA (138bp) protein (46aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UML6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82596.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_047G1_scaffold_1112_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7806..7958
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HNZ1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS05506.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_098_047G1_scaffold_1112_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8137..8838)
DNA (702bp) protein (234aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L3H6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56697.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_098_047G1_scaffold_1112_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8842..9678)
DNA (837bp) protein (279aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
N-acetylmuramic acid 6-phosphate etherase n=4 Tax=Bacteroides RepID=C6Z648_9BACE
murQ; N-acetylmuramic acid 6-phosphate etherase
L3_098_047G1_scaffold_1112_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9675..10514)
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L3H8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS56695.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_098_047G1_scaffold_1112_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10670..11455)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HWG1_BACVU
Response regulator {ECO:0000313|EMBL:KDS56694.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
two-component system response regulator
L3_098_047G1_scaffold_1112_14
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11448..12491)
DNA (1044bp) protein (348aa)
Histidine kinase n=7 Tax=Bacteroides RepID=C6Z651_9BACE
Histidine kinase {ECO:0000313|EMBL:EET16360.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
two-component system sensor kinase
L3_098_047G1_scaffold_1112_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12608..13246)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6L3I1_BACV8
Outer membrane beta-barrel domain protein {ECO:0000313|EMBL:KDS30463.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_098_047G1_scaffold_1112_16
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13259..13891)
DNA (633bp) protein (211aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6L3I2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV66656.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_098_047G1_scaffold_1112_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13917..14348)
DNA (432bp) protein (144aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L3I3_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82586.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_098_047G1_scaffold_1112_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14664..15218)
DNA (555bp) protein (185aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L3I4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF18384.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_098_047G1_scaffold_1112_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15232..15672
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L3I5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR40249.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying 19 items

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