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L3_098_047G1_scaffold_583

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_583_1
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1635)
DNA (1635bp) protein (545aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9GZV3_HAEHA
ftsH; ATP-dependent protease FtsH
L3_098_047G1_scaffold_583_2
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1725..2354)
DNA (630bp) protein (210aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042948}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042802};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
rlmE; 23S rRNA U2552 ribose 2-O-methyltransferase, SAM-dependent (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase E n=2 Tax=Haemophilus RepID=F9GZV4_HAEHA
L3_098_047G1_scaffold_583_3
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2481..2780
DNA (300bp) protein (100aa)
RNA-binding protein n=5 Tax=Haemophilus RepID=F9GKP4_HAEHA
RNA-binding protein, YhbY family {ECO:0000313|EMBL:EHO47625.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
RNA-binding protein
L3_098_047G1_scaffold_583_4
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2819..3295)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=2 Tax=Haemophilus haemolyticus RepID=F9GPA7_HAEHA
greA; transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
L3_098_047G1_scaffold_583_5
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3459..4898
DNA (1440bp) protein (480aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:EIJ74406.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EIJ74406.1};; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DRR3_HAEHA
D-alanyl-D-alanine carboxypeptidase
L3_098_047G1_scaffold_583_6
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4954..5751)
DNA (798bp) protein (266aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Haemophilus influenzae 7P49H1 RepID=C4EYL6_HAEIF
L3_098_047G1_scaffold_583_7
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5934..8177
DNA (2244bp) protein (748aa)
Putative uncharacterized protein n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GSE8_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EGT77825.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
hypothetical protein
L3_098_047G1_scaffold_583_8
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8237..10003
DNA (1767bp) protein (589aa)
Putative aBC transporter-like protein n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GSE7_HAEHA
Putative aBC transporter-like protein {ECO:0000313|EMBL:EGT77824.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
ABC transporter ATP-binding protein
L3_098_047G1_scaffold_583_9
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10073..10537)
DNA (465bp) protein (155aa)
Outer membrane lipoprotein pcp n=1 Tax=Haemophilus haemolyticus M19501 RepID=F9GR10_HAEHA
Outer membrane lipoprotein pcp {ECO:0000313|EMBL:EGT74509.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
outer membrane lipoprotein
L3_098_047G1_scaffold_583_10
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10571..10873)
DNA (303bp) protein (101aa)
Putative lipoprotein n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DS92_HAEHA
Putative lipoprotein {ECO:0000313|EMBL:EIJ74585.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
glucose-6-phosphate isomerase
L3_098_047G1_scaffold_583_11
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10877..11446)
DNA (570bp) protein (190aa)
Putative glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H029_HAEHA
Putative glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase {ECO:0000313|EMBL:EGT80135.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
hypothetical protein
L3_098_047G1_scaffold_583_12
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11526..13259
DNA (1734bp) protein (578aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LP89_9PAST
L3_098_047G1_scaffold_583_13
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13495..13896)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H1A5_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EGT78972.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
hypothetical protein
L3_098_047G1_scaffold_583_14
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13929..14393)
DNA (465bp) protein (155aa)
Membrane protein, PF03956 family n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DQX3_HAEHA
Membrane protein, PF03956 family {ECO:0000313|EMBL:EIJ74116.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
hypothetical protein
L3_098_047G1_scaffold_583_15
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14523..14993)
DNA (471bp) protein (157aa)
Redoxin n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DQZ3_HAEHA
Redoxin {ECO:0000313|EMBL:EIJ74136.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
hypothetical protein
L3_098_047G1_scaffold_583_16
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15037..15678)
DNA (642bp) protein (214aa)
Putative cytochrome c-type biogenesis protein HI_1454 n=9 Tax=Haemophilus RepID=Y1454_HAEIN
hypothetical protein
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EEW76465.1}; TaxID=656912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae RdAW.;"
L3_098_047G1_scaffold_583_17
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15690..16748)
DNA (1059bp) protein (353aa)
Methionine-R-sulfoxide reductase n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LN87_9PAST
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EHO48163.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
peptide methionine sulfoxide reductase msra/msrb
L3_098_047G1_scaffold_583_18
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16924..17787
DNA (864bp) protein (288aa)
EamA-like transporter family protein n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DQW3_HAEHA
EamA-like transporter family protein {ECO:0000313|EMBL:EIJ74106.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
Permease of the drug/metabolite transporter (DMT) superfamily
L3_098_047G1_scaffold_583_19
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17889..18062)
DNA (174bp) protein (58aa)
DsDNA-mimic protein n=4 Tax=Haemophilus haemolyticus RepID=F9GWK8_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EIJ74144.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
hypothetical protein
L3_098_047G1_scaffold_583_20
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18072..18710)
DNA (639bp) protein (213aa)
Putative RNA polymerase sigma factor n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GKF9_HAEHA
RNA polymerase sigma-70 factor family {ECO:0000313|EMBL:EHO48166.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
RNA polymerase sigma factor
L3_098_047G1_scaffold_583_21
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18730..19011
DNA (282bp) protein (94aa)
Pentapeptide MXKDX repeat protein n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LN91_9PAST
Pentapeptide MXKDX repeat protein {ECO:0000313|EMBL:EHO48167.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
L3_098_047G1_scaffold_583_22
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19079..20509)
DNA (1431bp) protein (477aa)
Ribonuclease G n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GWK6_HAEHA
ribonuclease G
Ribonuclease E/G family protein {ECO:0000313|EMBL:EIJ74186.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
L3_098_047G1_scaffold_583_23
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20625..22139
DNA (1515bp) protein (505aa)
Sodium/proline symporter n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DQW8_HAEHA
Sodium/proline symporter {ECO:0000313|EMBL:EIJ74111.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
putP; Sodium/proline symporter
L3_098_047G1_scaffold_583_24
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22136..23101
DNA (966bp) protein (322aa)
tRNA (mo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194472}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194476};; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
tRNA (mo5U34)-methyltransferase n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DQY1_HAEHA
hypothetical protein
L3_098_047G1_scaffold_583_25
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23153..23644)
DNA (492bp) protein (164aa)
ilvH; Acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=4 Tax=Haemophilus RepID=F9GHH6_HAEHA
Acetolactate synthase small subunit {ECO:0000313|EMBL:EGT74513.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
L3_098_047G1_scaffold_583_26
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23644..25365)
DNA (1722bp) protein (574aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
ilvI; acetolactate synthase 3 catalytic subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Haemophilus haemolyticus M19501 RepID=F9GR15_HAEHA
L3_098_047G1_scaffold_583_27
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25633..27153)
DNA (1521bp) protein (507aa)
Putative ATP synthase F0, A subunit n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LP92_9PAST
Putative ATP synthase F0, A subunit {ECO:0000313|EMBL:EHO47704.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
nhaC; Na+/H+ antiporter
L3_098_047G1_scaffold_583_28
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27612..28016
DNA (405bp) protein (135aa)
DNA-binding protein H-NS n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9GZG9_HAEHA
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
hns; DNA-binding protein H-NS-like protein
L3_098_047G1_scaffold_583_29
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28087..28923
DNA (837bp) protein (279aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
Formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LP94_9PAST
L3_098_047G1_scaffold_583_30
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28923..30221
DNA (1299bp) protein (433aa)
5-Enolpyruvylshikimate-3-phosphate synthase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=656913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae NT127.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Haemophilus influenzae NT127 RepID=C9MBY9_HAEIF
Displaying items 1-30 of 89 in total

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