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L3_098_047G1_scaffold_863

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_863_1
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(530..766)
DNA (237bp) protein (79aa)
Ribosomal RNA large subunit methyltransferase K/L n=2 Tax=Haemophilus influenzae RepID=E4QXI1_HAEI6
rlmL; 23S rRNA m(2)G2445 methyltransferase
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=656913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae NT127.;"
L3_098_047G1_scaffold_863_2
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(822..2615)
DNA (1794bp) protein (598aa)
rlmL; Ribosomal RNA large subunit methyltransferase L (EC:2.1.1.173)
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LNI4_9PAST
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
L3_098_047G1_scaffold_863_3
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3053..4120
DNA (1068bp) protein (356aa)
Membrane-bound lytic murein transglycosylase A n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H1W1_HAEHA
Membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:EGT78538.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
murein transglycosylase
L3_098_047G1_scaffold_863_4
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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4120..4296
DNA (177bp) protein (59aa)
Putative uBA/THIF-type NAD/FAD binding fold-containing protein n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GH64_HAEHA
Putative uBA/THIF-type NAD/FAD binding fold-containing protein {ECO:0000313|EMBL:EGT78751.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
hypothetical protein
L3_098_047G1_scaffold_863_5
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4301..4813
DNA (513bp) protein (171aa)
Putative uBA/THIF-type NAD/FAD binding fold-containing protein n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GH64_HAEHA
Murein transglycosylase A {ECO:0000313|EMBL:EDK13607.1}; TaxID=375063 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae 22.4-21.;"
hypothetical protein
L3_098_047G1_scaffold_863_6
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4991..6019
DNA (1029bp) protein (343aa)
High-affinity zinc uptake system protein znuA n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GS07_HAEHA
High-affinity zinc uptake system protein znuA {ECO:0000313|EMBL:EGT77923.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
zinc transporter subunit: periplasmic-binding component of ABC superfamily
L3_098_047G1_scaffold_863_7
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6069..6575)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Haemophilus RepID=H1LNI0_9PAST
Uncharacterized protein {ECO:0000313|EMBL:EHO48069.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
Arabinose efflux permease
L3_098_047G1_scaffold_863_8
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6683..8044)
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Haemophilus haemolyticus HK386 RepID=I3DRE3_HAEHA
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:EIJ74286.1}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
znuA; high-affinity zinc transporter periplasmic component
L3_098_047G1_scaffold_863_9
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8188..8754
DNA (567bp) protein (189aa)
Putative lipoprotein n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H8I2_HAEHA
Putative lipoprotein {ECO:0000313|EMBL:EGT78756.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
putative lipoprotein
L3_098_047G1_scaffold_863_10
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8803..9990)
DNA (1188bp) protein (396aa)
cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase n=1 Tax=Haemophilus haemolyticus M19501 RepID=F9GP45_HAEHA
Cystathionine beta-lyase {ECO:0000313|EMBL:EGT76174.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
L3_098_047G1_scaffold_863_11
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10122..10730
DNA (609bp) protein (203aa)
Antioxidant, AhpC/TSA family n=6 Tax=Haemophilus RepID=H1LNH5_9PAST
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EHO48065.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
tsaA; peroxiredoxin
L3_098_047G1_scaffold_863_12
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10831..11388
DNA (558bp) protein (186aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EIJ74287.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EIJ74287.1};; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
pgsA; CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=6 Tax=Haemophilus haemolyticus RepID=F9GGR9_HAEHA
L3_098_047G1_scaffold_863_13
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11807..12526
DNA (720bp) protein (240aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
trmJ; tRNA mC32/mU32 methyltransferase, SAM-dependent (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LPG3_9PAST
L3_098_047G1_scaffold_863_14
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12583..13038
DNA (456bp) protein (152aa)
Iron-sulfur cluster assembly transcription factor IscR n=4 Tax=Haemophilus RepID=H1LPG4_9PAST
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:EGT76841.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
iscR; Iron-sulfur cluster regulator IscR
L3_098_047G1_scaffold_863_15
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13110..14324
DNA (1215bp) protein (405aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
iscS; Cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Haemophilus haemolyticus M19501 RepID=F9GMJ1_HAEHA
L3_098_047G1_scaffold_863_16
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14382..14765
DNA (384bp) protein (128aa)
NifU-like protein n=8 Tax=Haemophilus RepID=F9GLB5_HAEHA
NifU-like protein {ECO:0000313|EMBL:EGT82579.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
NifU-like protein
L3_098_047G1_scaffold_863_17
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14819..15142
DNA (324bp) protein (108aa)
Iron-binding protein iscA n=6 Tax=Haemophilus RepID=F9GLB4_HAEHA
Iron-binding protein IscA {ECO:0000256|SAAS:SAAS00037071}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
iscA; iron-sulfur cluster assembly protein IscA
L3_098_047G1_scaffold_863_18
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15155..15676
DNA (522bp) protein (174aa)
Co-chaperone protein HscB homolog n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H0I2_HAEHA
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
hscB; co-chaperone HscB
L3_098_047G1_scaffold_863_19
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15707..16393
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9GYJ6_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EGT80534.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
hypothetical protein
L3_098_047G1_scaffold_863_20
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16412..18271
DNA (1860bp) protein (620aa)
Chaperone protein HscA homolog n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GI99_HAEHA
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=1095742 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus HK386.;"
hscA; Chaperone protein HscA
L3_098_047G1_scaffold_863_21
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18258..18653
DNA (396bp) protein (132aa)
Ferredoxin, 2Fe-2S type, ISC system n=6 Tax=Haemophilus RepID=H1LPH1_9PAST
Ferredoxin, 2Fe-2S type, ISC system {ECO:0000313|EMBL:EHO47296.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
[2Fe-2S] ferredoxin
L3_098_047G1_scaffold_863_22
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18653..18847
DNA (195bp) protein (65aa)
Fe-S cluster related protein IscX n=8 Tax=Haemophilus influenzae RepID=E4QW47_HAEI6
hypothetical protein
FeS assembly protein IscX {ECO:0000313|EMBL:EEW78246.1}; TaxID=656913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae NT127.;"
L3_098_047G1_scaffold_863_23
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19137..21950)
DNA (2814bp) protein (938aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
ribonuclease E (EC:2.7.1.50)
Ribonuclease E n=1 Tax=Haemophilus haemolyticus M19107 RepID=F9GK68_HAEHA
L3_098_047G1_scaffold_863_24
unknown

Not on your lists

22263..22415
DNA (153bp) protein (51aa)

This feature has no annotations

L3_098_047G1_scaffold_863_25
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22416..24338
DNA (1923bp) protein (641aa)
yoaA; Putative ATP-dependent DNA helicase YoaA (EC:3.6.1.-)
ATP-dependent DNA helicase DinG n=1 Tax=Haemophilus aegyptius ATCC 11116 RepID=F2BYP4_HAEAE
Probable ATP-dependent helicase {ECO:0000313|EMBL:EDK12205.1}; TaxID=374933 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae PittII.;"
L3_098_047G1_scaffold_863_26
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24352..25062
DNA (711bp) protein (237aa)
Universal bacterial protein YeaZ n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LPB2_9PAST
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EHO47399.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
hypothetical protein
L3_098_047G1_scaffold_863_27
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25087..25638
DNA (552bp) protein (184aa)
Putative lipoprotein n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H259_HAEHA
Putative lipoprotein {ECO:0000313|EMBL:EGT78273.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
hypothetical protein
L3_098_047G1_scaffold_863_28
Haemophilus sp. oral taxon 851, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25681..27369
DNA (1689bp) protein (563aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
CoA ligase n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LPB4_9PAST
CoA ligase {ECO:0000313|EMBL:EHO47401.1}; TaxID=762965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus sp. oral taxon 851 str. F0397.;"
L3_098_047G1_scaffold_863_29
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27427..28584
DNA (1158bp) protein (386aa)
rnd; ribonuclease D (EC:3.1.13.5)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1334187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae KR494.;"
Ribonuclease D n=1 Tax=Haemophilus influenzae KR494 RepID=T2BL48_HAEIF
L3_098_047G1_scaffold_863_30
unknown

Not on your lists

comp(28684..28794)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 30 items

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