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L3_098_047G1_scaffold_280

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_280_1
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3..905)
DNA (903bp) protein (301aa)
Ferrous iron transport protein B n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KM68_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:EFG25195.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
ferrous iron transporter B
L3_098_047G1_scaffold_280_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(915..1148)
DNA (234bp) protein (78aa)
Ferrous iron transport protein A n=2 Tax=Veillonella RepID=T0T6I0_9FIRM
Ferrous iron transport protein A {ECO:0000313|EMBL:EQC66622.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
FeoA family protein
L3_098_047G1_scaffold_280_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1686..2984
DNA (1299bp) protein (433aa)
Toxin-antitoxin system toxin component, PIN family n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXT4_9FIRM
Toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:EGL77836.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
DEAD/DEAH box helicase
L3_098_047G1_scaffold_280_4
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3197..5506)
DNA (2310bp) protein (770aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
DNA topoisomerase n=2 Tax=Veillonella sp. 6_1_27 RepID=D6KM65_9FIRM
DNA topoisomerase III
L3_098_047G1_scaffold_280_5
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5685..7280
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=2 Tax=Veillonella sp. 3_1_44 RepID=D6KH00_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
peptide chain release factor 3
L3_098_047G1_scaffold_280_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7726..8973
DNA (1248bp) protein (416aa)
Sodium/glutamate symporter n=3 Tax=Veillonella parvula RepID=T0UHI3_9FIRM
Putative sodium/glutamate symporter {ECO:0000313|EMBL:EFB86631.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
sodium/glutamate symporter
L3_098_047G1_scaffold_280_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(9064..9918)
DNA (855bp) protein (285aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Veillonella RepID=D6KGZ8_9FIRM
dimethyladenosine transferase
L3_098_047G1_scaffold_280_8
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9932..10459)
DNA (528bp) protein (176aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UPI0003D5D118 related cluster n=1 Tax=unknown RepID=UPI0003D5D118
primase/topoisomerase-like protein
L3_098_047G1_scaffold_280_9
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10565..11503
DNA (939bp) protein (313aa)
Transcriptional regulator, MarR family n=4 Tax=Veillonella RepID=D1BLQ0_VEIPT
MarR family transcriptional regulator
Transcriptional regulator CpsY {ECO:0000313|EMBL:EFG23394.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
L3_098_047G1_scaffold_280_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11757..12878
DNA (1122bp) protein (374aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EGL77796.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EGL77796.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Methionine synthase, vitamin-B12 independent n=3 Tax=Veillonella RepID=D1YMK8_9FIRM
vitamin-B12 independent methionine synthase
L3_098_047G1_scaffold_280_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12879..13817
DNA (939bp) protein (313aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Peptide methionine sulfoxide reductase MsrA n=3 Tax=Veillonella RepID=D6KGZ4_9FIRM
methionine-R-sulfoxide reductase
L3_098_047G1_scaffold_280_12
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13940..14917)
DNA (978bp) protein (326aa)
3D domain protein n=4 Tax=Veillonella RepID=D1YMK6_9FIRM
3D protein {ECO:0000313|EMBL:ETJ02354.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_098_047G1_scaffold_280_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15343..17460)
DNA (2118bp) protein (706aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Polyphosphate kinase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXS4_9FIRM
polyphosphate kinase
L3_098_047G1_scaffold_280_14
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17450..19015)
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KM57_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFG25184.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Exopolyphosphatase-like protein
L3_098_047G1_scaffold_280_15
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19015..20562)
DNA (1548bp) protein (516aa)
Putative exopolyphosphatase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KM56_9FIRM
Putative exopolyphosphatase {ECO:0000313|EMBL:EFG25183.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Ppx/GppA phosphatase
L3_098_047G1_scaffold_280_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20778..21548)
DNA (771bp) protein (257aa)
Hydrolase, TatD family n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLP3_VEIPT
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ACZ24300.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L3_098_047G1_scaffold_280_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(21548..23494)
DNA (1947bp) protein (649aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Methionine--tRNA ligase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KGY8_9FIRM
methionyl-tRNA synthetase
L3_098_047G1_scaffold_280_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23529..24377)
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Ribosomal RNA small subunit methyltransferase I n=3 Tax=Veillonella parvula RepID=T0T6F4_9FIRM
uroporphyrin-III C/tetrapyrrole methyltransferase
L3_098_047G1_scaffold_280_19
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24367..25092)
DNA (726bp) protein (242aa)
SAM-dependent methyltransferase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KM52_9FIRM
SAM-dependent methyltransferase {ECO:0000313|EMBL:EFG25179.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
methyltransferase small
L3_098_047G1_scaffold_280_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25085..25930)
DNA (846bp) protein (282aa)
PSP1 C-terminal domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXR7_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EGL78169.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
PSP1 domain-containing protein
L3_098_047G1_scaffold_280_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25931..26971)
DNA (1041bp) protein (347aa)
DNA polymerase III, delta prime subuni {ECO:0000313|EMBL:EQC66603.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EQC66603.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
DNA polymerase III, delta prime subuni n=1 Tax=Veillonella parvula HSIVP1 RepID=T0UHH2_9FIRM
DNA polymerase III subunits gamma/tau
L3_098_047G1_scaffold_280_22
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27047..27733)
DNA (687bp) protein (229aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Thymidylate kinase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KM49_9FIRM
thymidylate kinase
L3_098_047G1_scaffold_280_23
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27736..29217)
DNA (1482bp) protein (494aa)
Arginine decarboxylase Lysine decarboxylase Ornithine decarboxylase n=3 Tax=Veillonella RepID=T0T6F1_9FIRM
Arginine 2-monooxygenase {ECO:0000313|EMBL:EFG23379.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Orn/Lys/Arg decarboxylase major region
L3_098_047G1_scaffold_280_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29275..29853)
DNA (579bp) protein (193aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Peptidyl-tRNA hydrolase n=4 Tax=Veillonella RepID=T0SZH0_9FIRM
peptidyl-tRNA hydrolase
L3_098_047G1_scaffold_280_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29864..30817)
DNA (954bp) protein (318aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribose-phosphate pyrophosphokinase n=5 Tax=Veillonella RepID=D1BLN4_VEIPT
ribose-phosphate pyrophosphokinase
L3_098_047G1_scaffold_280_26
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30945..32318)
DNA (1374bp) protein (458aa)
UPI0003D6865C related cluster n=1 Tax=unknown RepID=UPI0003D6865C
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
UDP-N-acetylglucosamine pyrophosphorylase
L3_098_047G1_scaffold_280_27
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32450..33268)
DNA (819bp) protein (273aa)
Pur operon repressor PurR n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXR0_9FIRM
Pur operon repressor PurR {ECO:0000313|EMBL:ETJ02339.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
purine operon repressor, PurR
L3_098_047G1_scaffold_280_28
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(33495..34103)
DNA (609bp) protein (203aa)
UPI0003D63AF1 related cluster n=1 Tax=unknown RepID=UPI0003D63AF1
3D protein {ECO:0000313|EMBL:ETJ02338.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_098_047G1_scaffold_280_29
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(34366..35538)
DNA (1173bp) protein (391aa)
UPI0003D605BE related cluster n=1 Tax=unknown RepID=UPI0003D605BE
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Na+/H+ antiporter NhaA
L3_098_047G1_scaffold_280_30
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35574..36755)
DNA (1182bp) protein (394aa)
UPI0003D68A49 related cluster n=1 Tax=unknown RepID=UPI0003D68A49
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Na+/H+ antiporter NhaA
Displaying items 1-30 of 32 in total

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