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L3_098_047G1_scaffold_2175

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_047G1_scaffold_2175_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..165)
DNA (165bp) protein (55aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribonuclease Y n=4 Tax=Veillonella parvula RepID=T0T3U2_9FIRM
RNA binding metal dependent phosphohydrolase
L3_098_047G1_scaffold_2175_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(284..727)
DNA (444bp) protein (148aa)
Regulatory protein RecX n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U6_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
regulatory protein RecX
L3_098_047G1_scaffold_2175_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(730..1770)
DNA (1041bp) protein (347aa)
Protein RecA n=3 Tax=Veillonella RepID=T0UFD6_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
recA protein
L3_098_047G1_scaffold_2175_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1775..3022)
DNA (1248bp) protein (416aa)
Putative competence-damage inducible protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U4_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
competence/damage-inducible protein CinA
L3_098_047G1_scaffold_2175_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3060..4424)
DNA (1365bp) protein (455aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U3_9FIRM
MiaB-like tRNA modifying enzyme YliG
L3_098_047G1_scaffold_2175_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4466..5503)
DNA (1038bp) protein (346aa)
ABC transporter, solute-binding protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2U2_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EGL76452.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
extracellular solute-binding protein
L3_098_047G1_scaffold_2175_7
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(5560..7506)
DNA (1947bp) protein (649aa)
UPF0313 protein HMPREF0873_00587 n=2 Tax=Veillonella RepID=D6KIJ0_9FIRM
UPF0313 protein HMPREF0873_00587 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
radical SAM protein
L3_098_047G1_scaffold_2175_8
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7546..7998)
DNA (453bp) protein (151aa)
Transcriptional regulator, nRE family n=4 Tax=Veillonella RepID=T0UFE1_9FIRM
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFG23938.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
XRE family transcriptional regulator
L3_098_047G1_scaffold_2175_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8017..10671)
DNA (2655bp) protein (885aa)
Stage III sporulation protein E n=2 Tax=Veillonella RepID=D6KNP1_9FIRM
Stage III sporulation protein E {ECO:0000313|EMBL:EGL76568.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
cell division protein FtsK
L3_098_047G1_scaffold_2175_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10754..12055)
DNA (1302bp) protein (434aa)
UPI0003D5F339 related cluster n=1 Tax=unknown RepID=UPI0003D5F339
Recombination factor protein RarA {ECO:0000313|EMBL:ETI97117.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ATPase AAA
L3_098_047G1_scaffold_2175_11
unknown

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12293..12508
DNA (216bp) protein (72aa)

This feature has no annotations

L3_098_047G1_scaffold_2175_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(12574..14391)
DNA (1818bp) protein (606aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EFB85402.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EFB85402.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Aspartate--tRNA ligase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YS29_9FIRM
aspartyl-tRNA synthetase
Displaying 12 items

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