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L3_098_220G1_scaffold_57

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Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_57_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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264..1625
DNA (1362bp) protein (454aa)
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
ATP-dependent RNA helicase RhlE n=211 Tax=Escherichia RepID=E2QIG5_ECOLX
rhlE; ATP-dependent RNA helicase RhlE
L3_098_220G1_scaffold_57_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2163..4313
DNA (2151bp) protein (717aa)
ATP-dependent DNA helicase DinG n=1 Tax=Escherichia coli KTE102 RepID=S1HMY8_ECOLX
ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:EIL47206.1}; TaxID=752785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 541-15.;"
dinG; ATP-dependent DNA helicase DinG
L3_098_220G1_scaffold_57_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4341..5303
DNA (963bp) protein (321aa)
Glycosyl transferase protein (EC:2.4.2.18)
Uncharacterized protein n=112 Tax=Escherichia RepID=D2NFG0_ECOS5
Putative uncharacterized protein {ECO:0000313|EMBL:EGI51116.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L3_098_220G1_scaffold_57_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5444..6529
DNA (1086bp) protein (362aa)
ybiC; putative oxidoreductase ybiC (EC:1.1.1.-)
Putative dehydrogenase {ECO:0000313|EMBL:CKH92986.1}; EC=1.1.1.- {ECO:0000313|EMBL:CKH92986.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Malate/L-lactate dehydrogenase n=81 Tax=Escherichia RepID=D5CY05_ECOKI
L3_098_220G1_scaffold_57_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6757..7017)
DNA (261bp) protein (87aa)
Uncharacterized protein YbiJ n=1038 Tax=Enterobacteriaceae RepID=YBIJ_ECOL6
ybiJ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP59612.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_098_220G1_scaffold_57_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7282..7548)
DNA (267bp) protein (89aa)
C4-type zinc finger protein, DksA/TraR family n=15 Tax=Escherichia coli RepID=B3HWQ4_ECOLX
hypothetical protein
Prokaryotic dksA/traR C4-type zinc finger family protein {ECO:0000313|EMBL:EFV00323.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
L3_098_220G1_scaffold_57_7
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7622..8296)
DNA (675bp) protein (225aa)
PKHD-type hydroxylase YbiX {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
PKHD-type hydroxylase YbiX n=177 Tax=Escherichia RepID=YBIX_ECOL6
Fe(II)-dependent oxygenase
L3_098_220G1_scaffold_57_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8515..10797)
DNA (2283bp) protein (761aa)
Ferrichrome-iron receptor n=3 Tax=Escherichia coli RepID=E7U3F6_ECOLX
Catecholate siderophore receptor fiu {ECO:0000313|EMBL:EZJ45122.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
fiu; catecholate siderophore receptor Fiu
L3_098_220G1_scaffold_57_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11062..11322)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=B7MQR0_ECO81
ybiM; hypothetical protein
MqsR-controlled colanic acid and biofilm protein A {ECO:0000313|EMBL:ESD33233.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_098_220G1_scaffold_57_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11598..12524
DNA (927bp) protein (309aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
Ribosomal RNA large subunit methyltransferase F n=4 Tax=Enterobacteriaceae RepID=B6I7W4_ECOSE
ybiN; SAM-dependent methyltransferase
L3_098_220G1_scaffold_57_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12521..14746)
DNA (2226bp) protein (742aa)
Uncharacterized mscS family protein ybiO n=121 Tax=Escherichia coli RepID=E2QIH5_ECOLX
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EHU47338.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
ybiO; membrane protein YbiO
L3_098_220G1_scaffold_57_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14863..15585)
DNA (723bp) protein (241aa)
ATP-binding component of glutamine high-affinity transport system n=1131 Tax=Enterobacteriaceae RepID=C3THN2_ECOLX
glnQ; glutamine ABC transporter ATP-binding protein
Glutamine transporter subunit {ECO:0000313|EMBL:AEQ11654.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
L3_098_220G1_scaffold_57_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15582..16241)
DNA (660bp) protein (220aa)
Glutamine transport system permease protein GlnP n=1364 Tax=Enterobacteriaceae RepID=GLNP_ECO57
glutamine transport system permease protein GlnP
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein {ECO:0000313|EMBL:KEJ61393.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_098_220G1_scaffold_57_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16380..17126)
DNA (747bp) protein (249aa)
Glutamine-binding periplasmic protein n=1333 Tax=Enterobacteriaceae RepID=GLNH_ECO57
cationic amino acid ABC transporter substrate-binding protein
Glutamine-binding periplasmic protein {ECO:0000313|EMBL:EOU71401.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L3_098_220G1_scaffold_57_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17530..18033)
DNA (504bp) protein (168aa)
DNA protection during starvation protein {ECO:0000256|HAMAP-Rule:MF_01441, ECO:0000256|SAAS:SAAS00013554}; EC=1.16.-.- {ECO:0000256|HAMAP-Rule:MF_01441, ECO:0000256|SAAS:SAAS00013562};; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
DNA protection during starvation protein n=2 Tax=Escherichia coli RepID=D7ZCA1_ECOLX
DNA starvation/stationary phase protection protein Dps
L3_098_220G1_scaffold_57_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18333..19220)
DNA (888bp) protein (296aa)
Threonine/homoserine exporter RhtA n=642 Tax=Enterobacteriaceae RepID=RHTA_ECO57
hypothetical protein
Threonine and homoserine efflux system {ECO:0000313|EMBL:EFF07121.2}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
L3_098_220G1_scaffold_57_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19573..20088
DNA (516bp) protein (172aa)
Outer membrane protein X n=1396 Tax=Enterobacteriaceae RepID=OMPX_ECO57
ompX; outer membrane protein
Outer membrane protein X {ECO:0000313|EMBL:EZJ45132.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_098_220G1_scaffold_57_18
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20138..21721)
DNA (1584bp) protein (528aa)
Putative integral membrane protein n=1 Tax=Escherichia coli WV_060327 RepID=E7U3E6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CDC76828.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
hypothetical protein
L3_098_220G1_scaffold_57_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21993..22121)
DNA (129bp) protein (43aa)
Small protein MntS n=1331 Tax=Enterobacteriaceae RepID=MNTS_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EII22069.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_098_220G1_scaffold_57_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22307..22774
DNA (468bp) protein (156aa)
Transcriptional regulator MntR n=1133 Tax=Enterobacteriaceae RepID=MNTR_ECOL6
DtxR family iron (metal) dependent repressor
MntR transcriptional repressor {ECO:0000313|EMBL:EHU42707.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L3_098_220G1_scaffold_57_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22771..23889
DNA (1119bp) protein (373aa)
Inner membrane protein ybiR n=209 Tax=Escherichia RepID=E2QII5_ECOLX
ybiR; Inner membrane protein YbiR
Inner membrane protein YbiR {ECO:0000313|EMBL:EQP58494.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_098_220G1_scaffold_57_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23947..24867)
DNA (921bp) protein (307aa)
Probable L,D-transpeptidase YbiS n=1305 Tax=Enterobacteriaceae RepID=YBIS_ECO57
ybiS; hypothetical protein
Putative periplasmic protein {ECO:0000313|EMBL:EGI46545.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_098_220G1_scaffold_57_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25086..26678
DNA (1593bp) protein (531aa)
Uncharacterized ABC transporter ATP-binding protein YbiT n=1150 Tax=Enterobacteriaceae RepID=YBIT_ECO57
ABC transporter
Putative ABC transporter with two ATP-binding domain protein {ECO:0000313|EMBL:EKJ81805.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L3_098_220G1_scaffold_57_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26878..27693)
DNA (816bp) protein (272aa)
Sugar phosphatase SupH {ECO:0000313|EMBL:EZJ53612.1}; EC=3.1.3.23 {ECO:0000313|EMBL:EZJ53612.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Type II HAD phosphatase n=34 Tax=Escherichia coli RepID=B7MQS5_ECO81
ybiV; type II HAD phosphatase
L3_098_220G1_scaffold_57_25
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27839..30271)
DNA (2433bp) protein (811aa)
Formate acetyltransferase 3 n=50 Tax=Escherichia RepID=E2QII9_ECOLX
Putative formate acetyltransferase 3 {ECO:0000313|EMBL:CDC76816.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
formate acetyltransferase
L3_098_220G1_scaffold_57_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30277..31176)
DNA (900bp) protein (300aa)
Glycyl-radical enzyme activating protein family protein n=162 Tax=Escherichia coli RepID=C2DKQ0_ECOLX
putative pyruvate formate-lyase 3 activating
Putative AdoMet-dependent glycyl radical activating enzyme {ECO:0000313|EMBL:CAR06993.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_098_220G1_scaffold_57_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31307..31969
DNA (663bp) protein (221aa)
Fructose-6-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00496}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_00496};; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
Fructose-6-phosphate aldolase 1 n=176 Tax=Escherichia coli RepID=FSAA_ECOL6
mipB; fructose-6-phosphate aldolase
L3_098_220G1_scaffold_57_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32045..32794)
DNA (750bp) protein (250aa)
Molybdopterin biosynthesis protein MoeB n=216 Tax=Escherichia RepID=A1A964_ECOK1
molybdopterin biosynthesis protein MoeB
Molybdopterin synthase sulfurylase MoeB {ECO:0000313|EMBL:EHU61912.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L3_098_220G1_scaffold_57_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32794..34029)
DNA (1236bp) protein (412aa)
Molybdopterin biosynthesis protein MoeA n=2 Tax=Escherichia coli RepID=E7U3D5_ECOLX
moeA; molybdopterin biosynthesis protein MoeA
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:EGI22173.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L3_098_220G1_scaffold_57_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34233..35198
DNA (966bp) protein (322aa)
L-asparaginase n=73 Tax=Escherichia RepID=B7UM23_ECO27
iaaA; L-asparaginase
IaaA {ECO:0000313|EMBL:EHU30624.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
Displaying items 1-30 of 102 in total

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