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L3_098_220G1_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_66_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..826
DNA (825bp) protein (275aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EEP53677.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EEP53677.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI25_CLOBU
putative oxidoreductase
L3_098_220G1_scaffold_66_2
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1175..1657
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5YXB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32038.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L3_098_220G1_scaffold_66_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1844..2311
DNA (468bp) protein (156aa)
IAA acetyltransferase {ECO:0000313|EMBL:AKB58211.1}; EC=2.3.1.- {ECO:0000313|EMBL:AKB58211.1};; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
IAA acetyltransferase (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TE58_CLOSG
L3_098_220G1_scaffold_66_4
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2416..3375
DNA (960bp) protein (320aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
tRNA-dihydrouridine synthase (EC:1.-.-.-)
diguanylate cyclase n=1 Tax=Clostridium arbusti RepID=UPI0002896680
L3_098_220G1_scaffold_66_5
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3852..4295
DNA (444bp) protein (148aa)
Transcriptional regulator, MarR family n=3 Tax=Clostridium perfringens RepID=B1BFR0_CLOPF
MarR family transcriptional regulator {ECO:0000313|EMBL:KEZ86999.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
MarR family transcriptional regulator
L3_098_220G1_scaffold_66_6
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4349..5254
DNA (906bp) protein (302aa)
Pirin domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKH6_CELLD
pirin
Pirin domain protein {ECO:0000313|EMBL:ADZ82136.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_098_220G1_scaffold_66_7
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5300..5896
DNA (597bp) protein (199aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
FMN-dependent NADH-azoreductase n=1 Tax=Clostridium colicanis 209318 RepID=N9WB73_9CLOT
flavodoxin family protein
L3_098_220G1_scaffold_66_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6831..8741
DNA (1911bp) protein (637aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Threonine--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EXK1_9CLOT
thrS2; threonyl-tRNA synthetase
L3_098_220G1_scaffold_66_9
unknown

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9453..9716
DNA (264bp) protein (88aa)

This feature has no annotations

L3_098_220G1_scaffold_66_10
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10123..10500
DNA (378bp) protein (126aa)
Transcriptional regulator MerR family n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LK47_ACEWD
MerR family transcriptional regulator
Transcriptional regulator MerR family {ECO:0000313|EMBL:AFA49967.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_098_220G1_scaffold_66_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10769..12115
DNA (1347bp) protein (449aa)
DNA-damage-inducible protein n=2 Tax=Clostridium butyricum RepID=B1QWC3_CLOBU
DNA-damage-inducible protein {ECO:0000313|EMBL:EEP56050.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
MATE efflux family protein
L3_098_220G1_scaffold_66_12
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

12187..12759
DNA (573bp) protein (191aa)
Phosphoglycerate mutase n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1APN1_SEBTE
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ACZ10065.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L3_098_220G1_scaffold_66_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12922..13734
DNA (813bp) protein (271aa)
purine nucleoside phosphorylase I (EC:2.4.2.1)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Purine nucleoside phosphorylase n=2 Tax=Clostridium botulinum B RepID=B2TL17_CLOBB
L3_098_220G1_scaffold_66_14
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14065..14535
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M8K6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM69940.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_098_220G1_scaffold_66_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14603..15988
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTC3_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42876.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_220G1_scaffold_66_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16218..16997
DNA (780bp) protein (260aa)
UPI0003A9C833 related cluster n=1 Tax=unknown RepID=UPI0003A9C833
GufA protein {ECO:0000313|EMBL:ETI87544.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
zinc/iron permease
L3_098_220G1_scaffold_66_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17874..18227)
DNA (354bp) protein (118aa)
Stage V sporulation protein AEB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N3P7_9CLOT
spoVAEB2; stage V sporulation protein AEB
Stage V sporulation protein AEB {ECO:0000313|EMBL:AGF58087.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_66_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18246..19247)
DNA (1002bp) protein (334aa)
Stage V sporulation protein AD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3N6_9CLOT
Stage V sporulation protein AD {ECO:0000313|EMBL:EEH98670.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoVAD; stage V sporulation protein AD
L3_098_220G1_scaffold_66_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19248..19727)
DNA (480bp) protein (160aa)
Stage V sporulation protein AC n=7 Tax=Clostridium botulinum RepID=C1FQZ7_CLOBJ
spoVAC_1; stage V sporulation protein AC
Stage V sporulation protein AC {ECO:0000313|EMBL:AJE10374.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
L3_098_220G1_scaffold_66_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19739..20599)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=C3KZ79_CLOB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE11060.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
L3_098_220G1_scaffold_66_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20612..20818)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98667.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_098_220G1_scaffold_66_22
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21125..21328
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20100.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_098_220G1_scaffold_66_23
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

comp(21848..22621)
DNA (774bp) protein (258aa)
Putative uncharacterized protein id=3085745 bin=GWF2_Clostridiales_36_10 species=Butyrivibrio proteoclasticus genus=Butyrivibrio taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Clostridiales_36_10_curated
L3_098_220G1_scaffold_66_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22830..24590
DNA (1761bp) protein (587aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897, ECO:0000313|EMBL:AIY79552.1}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897, ECO:0000313|EMBL:AIY79552.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium botulinum RepID=UPI0002DEE4ED
1-deoxy-D-xylulose-5-phosphate synthase
L3_098_220G1_scaffold_66_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25253..25414
DNA (162bp) protein (54aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QXR4_CLOBU
Zinc finger domain {ECO:0000313|EMBL:KJZ85322.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
zinc-binding domain protein
L3_098_220G1_scaffold_66_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25801..26700)
DNA (900bp) protein (300aa)
SAM-dependent methyltransferase n=2 Tax=Clostridium botulinum RepID=C3KZ55_CLOB6
SAM-dependent methyltransferase
Methyltransferase small domain protein {ECO:0000313|EMBL:AJE09533.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
L3_098_220G1_scaffold_66_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26965..31362
DNA (4398bp) protein (1466aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
polC; DNA polymerase III PolC-type (EC:2.7.7.7)
UPI0003D5C680 related cluster n=1 Tax=unknown RepID=UPI0003D5C680
L3_098_220G1_scaffold_66_28
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31874..32401
DNA (528bp) protein (176aa)
Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N513_CLOK5
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:BAH05342.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
L3_098_220G1_scaffold_66_29
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32519..34264
DNA (1746bp) protein (582aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030C6D9B
Uncharacterized protein {ECO:0000313|EMBL:EQB86416.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
uncharacterized ABC transporter, ATPase component
L3_098_220G1_scaffold_66_30
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34257..34910
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N8B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86415.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
Lipid A export ATP-binding/permease protein MsbA
Displaying items 1-30 of 79 in total

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