ggKbase home page

L3_098_220G1_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_91_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(104..616)
DNA (513bp) protein (171aa)
Cna protein B-type domain n=4 Tax=Clostridium butyricum RepID=B1QXF2_CLOBU
Cna B domain protein {ECO:0000313|EMBL:EEP55501.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Cna B domain protein
L3_098_220G1_scaffold_91_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(685..5994)
DNA (5310bp) protein (1770aa)
Diguanylate cyclase with TPR repeats n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA39_9CLOT
Diguanylate cyclase with TPR repeats {ECO:0000313|EMBL:EHJ01805.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
diguanylate cyclase
L3_098_220G1_scaffold_91_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6106..6825
DNA (720bp) protein (240aa)
yheN2; putative polysaccharide deacetylase YheN (EC:3.-.-.-)
Putative polysaccharide deacetylase YheN {ECO:0000313|EMBL:AGX44974.1}; EC=3.-.-.- {ECO:0000313|EMBL:AGX44974.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative polysaccharide deacetylase YheN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW33_CLOSA
L3_098_220G1_scaffold_91_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6886..7404)
DNA (519bp) protein (173aa)
Putative tryptophan transport protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1A7_CLOBA
Putative membrane protein {ECO:0000313|EMBL:AIY80314.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
putative tryptophan transport protein
L3_098_220G1_scaffold_91_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7449..7973)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MLN5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF58829.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_91_6
unknown

Not on your lists

comp(8380..8484)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_098_220G1_scaffold_91_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8521..8709)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZP6_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44977.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_220G1_scaffold_91_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8828..9700)
DNA (873bp) protein (291aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWS4_CLOSA
ttcA1; tRNA 2-thiocytidine biosynthesis protein TtcA
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000313|EMBL:AGX44978.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_220G1_scaffold_91_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10469..10678
DNA (210bp) protein (70aa)
Phage shock protein C, PspC n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA47_9CLOT
Phage shock protein C, PspC {ECO:0000313|EMBL:EHJ01813.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
PspC protein
L3_098_220G1_scaffold_91_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10878..11468
DNA (591bp) protein (197aa)
Membrane protein n=2 Tax=Clostridium botulinum B RepID=B2TLA7_CLOBB
membrane protein
Membrane protein {ECO:0000313|EMBL:ACD23918.1}; Substrate-specific component PanT of predicted pantothenate ECF transporter {ECO:0000313|EMBL:CDH89677.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_098_220G1_scaffold_91_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11571..12536
DNA (966bp) protein (322aa)
Peptidase S58 DmpA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWM1_CLOSA
peptidase S58 DmpA
Peptidase S58 DmpA {ECO:0000313|EMBL:AGX44980.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_220G1_scaffold_91_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12623..13582)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0ASJ7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35684.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_098_220G1_scaffold_91_13
Lysinibacillus sp. A1, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13739..14287)
DNA (549bp) protein (183aa)
ribosomal-protein-alanine acetyltransferase n=1 Tax=Clostridium arbusti RepID=UPI000288A57C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHK53373.1}; TaxID=1571920 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sp. A1.;"
L3_098_220G1_scaffold_91_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14497..15876)
DNA (1380bp) protein (460aa)
UPI0003D5B559 related cluster n=1 Tax=unknown RepID=UPI0003D5B559
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ETI90925.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
sodium:dicarboxylate symporter family protein
L3_098_220G1_scaffold_91_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16084..17019)
DNA (936bp) protein (312aa)
Putative deacylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUH7_9CLOT
Putative deacylase {ECO:0000313|EMBL:EKQ51041.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
succinylglutamate desuccinylase/aspartoacylase
L3_098_220G1_scaffold_91_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17019..17954)
DNA (936bp) protein (312aa)
Putative deacylase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MR56_CLOSA
putative deacylase
Putative deacylase {ECO:0000313|EMBL:AGX41877.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_220G1_scaffold_91_17
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18277..18840
DNA (564bp) protein (188aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:ADZ85704.1}; EC=1.11.1.15 {ECO:0000313|EMBL:ADZ85704.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Peroxiredoxin n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JL59_CELLD
L3_098_220G1_scaffold_91_18
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19172..20848
DNA (1677bp) protein (559aa)
Putative alkyl hydroperoxide reductase F subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHK9_9CLOT
putative thioredoxin reductase
Putative thioredoxin reductase {ECO:0000313|EMBL:CDM67886.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_098_220G1_scaffold_91_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20892..21506)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KGC9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83773.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_098_220G1_scaffold_91_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21576..22412)
DNA (837bp) protein (279aa)
Metallo-beta-lactamase superfamily exported protein n=2 Tax=Clostridium butyricum RepID=B1QWF7_CLOBU
Metallo-beta-lactamase superfamily exported protein {ECO:0000313|EMBL:EEP53072.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
metallo-beta-lactamase superfamily exported protein
L3_098_220G1_scaffold_91_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22626..23300
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI00031427BF
Uncharacterized protein {ECO:0000313|EMBL:KHD16499.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L3_098_220G1_scaffold_91_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23411..24316
DNA (906bp) protein (302aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LXH4_9CLOT
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHD16498.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
transcriptional regulator, ArsR family
L3_098_220G1_scaffold_91_23
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24363..25688)
DNA (1326bp) protein (442aa)
Beta-xylosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T8T3_9CLOT
Beta-xylosidase {ECO:0000313|EMBL:EKQ56228.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
beta-xylosidase
L3_098_220G1_scaffold_91_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25768..26661)
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUU5_CLOC7
Sugar ABC transporter permease {ECO:0000313|EMBL:KHD16538.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
binding-protein-dependent transport system inner membrane protein
L3_098_220G1_scaffold_91_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26683..27588)
DNA (906bp) protein (302aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUU4_CLOC7
Sugar transporter {ECO:0000313|EMBL:KHD16537.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
binding-protein-dependent transport system inner membrane protein
L3_098_220G1_scaffold_91_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27695..29068)
DNA (1374bp) protein (458aa)
Extracellular solute-binding protein family 1 n=2 Tax=Geobacillus RepID=C9RT68_GEOSY
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD16497.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
extracellular solute-binding protein
L3_098_220G1_scaffold_91_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29687..30715)
DNA (1029bp) protein (343aa)
Putative beta-xylosidase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJ54_9CLOT
putative beta-xylosidase
Putative beta-xylosidase {ECO:0000313|EMBL:AGF57969.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_91_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31215..31469)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TRU1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KHD16495.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L3_098_220G1_scaffold_91_29
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31474..32949)
DNA (1476bp) protein (492aa)
Alpha-N-arabinofuranosidase 2 {ECO:0000313|EMBL:AJG99739.1}; EC=3.2.1.55 {ECO:0000313|EMBL:AJG99739.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Alpha-L-arabinofuranosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAB4_9CLOT
alpha-L-arabinofuranosidase
L3_098_220G1_scaffold_91_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33261..34193
DNA (933bp) protein (311aa)
Putative transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T5Q2_9CLOT
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHD16493.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ArsR family transcriptional regulator
Displaying items 1-30 of 60 in total

View Taxonomy