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L3_098_220G1_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_112_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117..662)
DNA (546bp) protein (182aa)
Protoporphyrinogen IX dehydrogenase [menaquinone] n=736 Tax=Enterobacteriaceae RepID=HEMG_ECO57
hemG; protoporphyrinogen oxidase
Protoporphyrinogen IX dehydrogenase {ECO:0000313|EMBL:EHU17820.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_098_220G1_scaffold_112_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(674..2125)
DNA (1452bp) protein (484aa)
Trk system potassium uptake protein n=387 Tax=Escherichia RepID=E2QI42_ECOLX
trkH; Trk system potassium uptake protein trkH
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_098_220G1_scaffold_112_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2164..2778)
DNA (615bp) protein (205aa)
Potassium uptake protein n=658 Tax=Enterobacteriaceae RepID=C3SJX2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX35013.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_098_220G1_scaffold_112_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2778..4109)
DNA (1332bp) protein (444aa)
pepQ; proline dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase {ECO:0000255|HAMAP-Rule:MF_01279}; Short=X-Pro dipeptidase {ECO:0000255|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000255|HAMAP-Rule:MF_01279};; Imidodipeptidase {ECO:0000255|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000255|HAMAP-Rule:MF_01279}; Short=Prolidase {ECO:0000255|HAMAP-Rule:MF_01279};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Xaa-Pro dipeptidase n=301 Tax=Escherichia RepID=PEPQ_ECO27
L3_098_220G1_scaffold_112_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4299..6488
DNA (2190bp) protein (730aa)
fadB; multifunctional fatty acid oxidation complex subunit alpha (EC:5.1.2.3)
Fatty acid oxidation complex subunit alpha n=1 Tax=Escherichia coli WV_060327 RepID=E7U0Q1_ECOLX
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01621, ECO:0000256|SAAS:SAAS00051741}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_098_220G1_scaffold_112_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6498..7661
DNA (1164bp) protein (388aa)
fadA; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01620}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01620};; Acetyl-CoA acyltransferase {ECO:0000256|HAMAP-Rule:MF_01620}; Beta-ketothiolase {ECO:0000256|HAMAP-Rule:MF_01620}; Fatty acid oxidation complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01620}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
3-ketoacyl-CoA thiolase n=133 Tax=Enterobacteriaceae RepID=FADA_ECOK1
L3_098_220G1_scaffold_112_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7933..8634)
DNA (702bp) protein (234aa)
FMN reductase domain protein {ECO:0000313|EMBL:EHV52303.1}; EC=1.5.1.- {ECO:0000313|EMBL:EHV52303.1};; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
NAD(P)H-flavin reductase n=1191 Tax=Enterobacteriaceae RepID=FRE_ECO57
fre; NAD(P)H-flavin reductase
L3_098_220G1_scaffold_112_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8680..10173)
DNA (1494bp) protein (498aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01636}; TaxID=656420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M863.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=2 Tax=Escherichia coli RepID=E7U0P8_ECOLX
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
L3_098_220G1_scaffold_112_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10340..10828
DNA (489bp) protein (163aa)
Transcription antitermination protein RfaH n=397 Tax=Escherichia RepID=RFAH_ECOL5
rfaH; transcriptional activator RfaH
Transcription antitermination protein RfaH {ECO:0000256|HAMAP-Rule:MF_00951}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_098_220G1_scaffold_112_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10825..11607)
DNA (783bp) protein (261aa)
Tat-linked quality control protein TatD n=106 Tax=Escherichia coli RepID=Q0TAL5_ECOL5
tatD; DNase TatD
Tat-linked quality control protein TatD {ECO:0000256|HAMAP-Rule:MF_00901}; Deoxyribonuclease TatD {ECO:0000256|HAMAP-Rule:MF_00901}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
L3_098_220G1_scaffold_112_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11649..12425)
DNA (777bp) protein (259aa)
Sec-independent protein translocase protein TatC n=378 Tax=Escherichia RepID=TATC_ECOL6
twin-arginine protein translocation system subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_098_220G1_scaffold_112_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12428..12943)
DNA (516bp) protein (172aa)
Sec-independent protein translocase protein TatB n=304 Tax=Escherichia RepID=TATB_ECOL5
tatB; sec-independent translocase
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1280976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 25 (4-5851939).;"
L3_098_220G1_scaffold_112_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12947..13216)
DNA (270bp) protein (90aa)
Sec-independent protein translocase protein TatA n=1283 Tax=Enterobacteriaceae RepID=TATA_ECO57
tatA; twin arginine translocase protein A
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L3_098_220G1_scaffold_112_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13295..14935)
DNA (1641bp) protein (547aa)
Probable protein kinase UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; EC=2.7.-.- {ECO:0000255|HAMAP-Rule:MF_00414};; Ubiquinone biosynthesis protein UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Probable protein kinase UbiB n=374 Tax=Enterobacteriaceae RepID=UBIB_ECO45
ubiB; putative ubiquinone biosynthesis protein UbiB
L3_098_220G1_scaffold_112_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14932..15537)
DNA (606bp) protein (202aa)
Uncharacterized protein n=137 Tax=Escherichia RepID=B1LM22_ECOSM
yigP; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELE51721.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_098_220G1_scaffold_112_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15551..16306)
DNA (756bp) protein (252aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000255|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000255|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000255|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000255|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000255|HAMAP-Rule:MF_01813}; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=381 Tax=Escherichia RepID=UBIE_ECO45
ubiE; ubiquinone/menaquinone biosynthesis protein
L3_098_220G1_scaffold_112_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16401..17828)
DNA (1428bp) protein (476aa)
DNA recombination protein RmuC n=165 Tax=Escherichia coli RepID=B1LM20_ECOSM
yigN; DNA recombination protein RmuC
DNA recombination protein rmuC {ECO:0000313|EMBL:KEL67856.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
L3_098_220G1_scaffold_112_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17969..18730)
DNA (762bp) protein (254aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNF18.;"
Uridine phosphorylase n=2 Tax=Escherichia coli RepID=B7N2D3_ECO81
uridine phosphorylase
L3_098_220G1_scaffold_112_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18992..19801
DNA (810bp) protein (270aa)
Carboxymethylenebutenolidase n=330 Tax=Escherichia RepID=E2QI19_ECOLX
ysgA; putative hydrolase
Carboxymethylenebutenolidase {ECO:0000313|EMBL:EQX24562.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_098_220G1_scaffold_112_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19832..19927)
DNA (96bp) protein (32aa)
Uncharacterized protein n=384 Tax=Escherichia RepID=B1LM10_ECOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU22926.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L3_098_220G1_scaffold_112_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20058..20726
DNA (669bp) protein (223aa)
Isochorismatase family protein n=287 Tax=Escherichia RepID=B1LM08_ECOSM
isochorismatase hydrolase
Isochorismatase {ECO:0000313|EMBL:EOV69245.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_098_220G1_scaffold_112_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20732..21592
DNA (861bp) protein (287aa)
Uncharacterized protein n=237 Tax=Escherichia RepID=B7MHA9_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQX24559.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L3_098_220G1_scaffold_112_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21687..23246
DNA (1560bp) protein (520aa)
YahF/FdrA-like protein n=121 Tax=Escherichia coli RepID=E1P915_ECOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP44443.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_098_220G1_scaffold_112_24
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23192..24667
DNA (1476bp) protein (492aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=T7RMP1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC77536.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L3_098_220G1_scaffold_112_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24660..25616
DNA (957bp) protein (319aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=4 Tax=Escherichia coli RepID=A1AI08_ECOK1
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_098_220G1_scaffold_112_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25633..26022
DNA (390bp) protein (130aa)
Uncharacterized protein n=406 Tax=Escherichia RepID=B1LM03_ECOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMD06330.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
L3_098_220G1_scaffold_112_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26048..27271
DNA (1224bp) protein (408aa)
Permease n=2 Tax=Escherichia coli RepID=T8TSJ7_ECOLX
putative permease; putative Purine-cytosine permease and related proteins
Nucleobase transporter {ECO:0000313|EMBL:EHU04065.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L3_098_220G1_scaffold_112_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27349..28254
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=3 Tax=Escherichia coli RepID=T8TUF1_ECOLX
hypothetical protein
LysR family transcriptional regulator {ECO:0000313|EMBL:EOW92958.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L3_098_220G1_scaffold_112_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28454..29299
DNA (846bp) protein (282aa)
Uncharacterized protein n=131 Tax=Escherichia coli RepID=B7N2C3_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP44437.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_098_220G1_scaffold_112_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29329..31326)
DNA (1998bp) protein (666aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
Transketolase n=14 Tax=Escherichia coli RepID=B7UNF0_ECO27
transketolase
Displaying items 1-30 of 94 in total

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