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L3_098_220G1_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_127_1
unknown

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comp(3..296)
DNA (294bp) protein (98aa)

This feature has no annotations

L3_098_220G1_scaffold_127_2
unknown

Not on your lists

comp(304..402)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_098_220G1_scaffold_127_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(591..1964)
DNA (1374bp) protein (458aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIF3_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EKY27726.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
RNA methyltransferase
L3_098_220G1_scaffold_127_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2387..3799)
DNA (1413bp) protein (471aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJG8_9CLOT
L3_098_220G1_scaffold_127_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3867..4826)
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIC5_9CLOT
L3_098_220G1_scaffold_127_6
CG_CPR10_01, CG_CPR10, Bacteria

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comp(5309..10135)
DNA (4827bp) protein (1609aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034AC0C3
DNA polymerase III, alpha subunit, interruption-C
Tax=CG_CPR10_01
L3_098_220G1_scaffold_127_7
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10363..11313)
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Clostridium sp. CAG:265 RepID=R6KGA1_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L3_098_220G1_scaffold_127_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11593..12915)
DNA (1323bp) protein (441aa)
Putative gluconeogenesis factor n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJH4_9CLOT
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_220G1_scaffold_127_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12909..13796)
DNA (888bp) protein (296aa)
UPF0042 nucleotide-binding protein HMPREF0216_01207 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QID0_9CLOT
Nucleotide-binding protein HMPREF0216_01207 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_220G1_scaffold_127_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13975..14889)
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QI85_9CLOT
L3_098_220G1_scaffold_127_11
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14969..16834)
DNA (1866bp) protein (622aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:221 RepID=R6FV55_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
uvrC; UvrABC system protein C
L3_098_220G1_scaffold_127_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16990..18543)
DNA (1554bp) protein (518aa)
Penicillin-binding protein A family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJH9_9CLOT
Penicillin-binding protein A family protein {ECO:0000313|EMBL:EKY27737.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
penicillin-binding protein
L3_098_220G1_scaffold_127_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18547..19767)
DNA (1221bp) protein (407aa)
Putative FtsW-like protein RodA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C7E3_9CLOT
Putative FtsW-like protein RodA {ECO:0000313|EMBL:EOR25203.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
cell cycle family protein
L3_098_220G1_scaffold_127_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19853..20302)
DNA (450bp) protein (150aa)
FHA domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJ85_9CLOT
FHA domain protein {ECO:0000313|EMBL:EKY27740.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
FHA domain containing protein
L3_098_220G1_scaffold_127_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20378..23203)
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIG7_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
uvrA; excinuclease ABC subunit A
L3_098_220G1_scaffold_127_16
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23497..24381)
DNA (885bp) protein (295aa)
Histidine kinase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KST1_9CLOT
Histidine kinase {ECO:0000313|EMBL:CDB74204.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
histidine kinase
L3_098_220G1_scaffold_127_17
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24621..26237)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KG89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74203.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
ABC-type transport system, permease
L3_098_220G1_scaffold_127_18
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26230..26943)
DNA (714bp) protein (238aa)
ABC transporter n=1 Tax=Clostridium sp. CAG:265 RepID=R6LJ46_9CLOT
ABC transporter {ECO:0000313|EMBL:CDB74202.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
ABC transporter ATP-binding protein
L3_098_220G1_scaffold_127_19
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26986..27279)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KW88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74201.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
L3_098_220G1_scaffold_127_20
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27300..28181)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KL33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74200.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L3_098_220G1_scaffold_127_21
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28174..29097)
DNA (924bp) protein (308aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:265 RepID=R6KSS7_9CLOT
ABC transporter related {ECO:0000313|EMBL:CDB74199.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
bcrA; Bacitracin transport ATP-binding protein BcrA
L3_098_220G1_scaffold_127_22
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29359..30060)
DNA (702bp) protein (234aa)
Two component transcriptional regulator winged helix family n=1 Tax=Clostridium sp. CAG:265 RepID=R6KYG3_9CLOT
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDB74966.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
two component transcriptional regulator, winged helix family
L3_098_220G1_scaffold_127_23
unknown

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comp(30219..30452)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_098_220G1_scaffold_127_24
unknown

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comp(30477..31091)
DNA (615bp) protein (205aa)

This feature has no annotations

L3_098_220G1_scaffold_127_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31506..33479)
DNA (1974bp) protein (658aa)
UvrABC system protein B n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIA9_9CLOT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
uvrB; UvrABC system protein B
L3_098_220G1_scaffold_127_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33588..34856)
DNA (1269bp) protein (423aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJA6_9CLOT
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:EKY27760.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_220G1_scaffold_127_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34871..36139)
DNA (1269bp) protein (423aa)
carboxyl-terminal protease (EC:3.4.21.102)
Peptidase, S41 family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QII8_9CLOT
Peptidase, S41 family {ECO:0000313|EMBL:EKY27761.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_098_220G1_scaffold_127_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36283..37173)
DNA (891bp) protein (297aa)
Cell division protein FtsX n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJK6_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cell-division protein
L3_098_220G1_scaffold_127_29
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37163..37849)
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=1 Tax=Clostridium sp. CAG:265 RepID=R6KYG7_9CLOT
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDB74971.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
cell division ATP-binding protein FtsE
L3_098_220G1_scaffold_127_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37968..38804)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27764.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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