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L3_098_220G1_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_146_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(137..778)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MLM1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57138.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_146_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1144..2814
DNA (1671bp) protein (557aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
leuA1; 2-isopropylmalate synthase LeuA (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TAS6_9CLOT
L3_098_220G1_scaffold_146_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3710..4873
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARD4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88265.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
aminotransferase class I and II
L3_098_220G1_scaffold_146_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5096..5950
DNA (855bp) protein (285aa)
Lipoprotein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JJP2_CLOBU
YaeC family lipoprotein {ECO:0000313|EMBL:ENZ35323.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metQ2; methionine-binding lipoprotein MetQ
L3_098_220G1_scaffold_146_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6097..7125
DNA (1029bp) protein (343aa)
metN2; methionine import ATP-binding protein MetN 1 (EC:3.6.3.-)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Methionine import ATP-binding protein MetN 1 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LRY8_9CLOT
L3_098_220G1_scaffold_146_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7126..7788
DNA (663bp) protein (221aa)
D-methionine transport system permease protein MetI n=2 Tax=Clostridium butyricum RepID=M8JAM6_CLOBU
metI2; putative D-methionine transport system permease protein MetI
Methionine ABC transporter permease protein {ECO:0000313|EMBL:KJZ88361.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_098_220G1_scaffold_146_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7851..9218
DNA (1368bp) protein (456aa)
FAD/FMN-containing dehydrogenase n=2 Tax=Clostridium butyricum RepID=M8KEM3_CLOBU
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:ENZ35320.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glcD2; glycolate oxidase subunit GlcD
L3_098_220G1_scaffold_146_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9458..9886)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZU3_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09673.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_098_220G1_scaffold_146_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9886..10527)
DNA (642bp) protein (214aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
pcp; pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XNL4_9CLOT
L3_098_220G1_scaffold_146_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10824..11753)
DNA (930bp) protein (310aa)
Permease n=2 Tax=Clostridium botulinum B RepID=B2TK94_CLOBB
permease
Permease {ECO:0000313|EMBL:ACD24585.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_098_220G1_scaffold_146_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11775..12446)
DNA (672bp) protein (224aa)
Permease n=2 Tax=Clostridium botulinum B RepID=B2TK95_CLOBB
permease
FIG015373: Membrane protein {ECO:0000313|EMBL:CDH90448.1}; Permease {ECO:0000313|EMBL:ACD24893.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_098_220G1_scaffold_146_12
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13071..13628
DNA (558bp) protein (186aa)
Cyclase family protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQY6_CLOC7
cyclase family protein
Cyclase family protein {ECO:0000313|EMBL:ADL50274.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_098_220G1_scaffold_146_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13814..14584
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K4U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN43181.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
short-chain dehydrogenase/reductase SDR
L3_098_220G1_scaffold_146_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14909..16726
DNA (1818bp) protein (606aa)
Na+/H+ antiporter n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LXH6_CLOB8
nhaK; sodium, potassium, lithium and rubidium/H(+) antiporter NhaK
Na+/H+ antiporter {ECO:0000313|EMBL:ABR35056.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_098_220G1_scaffold_146_15
unknown

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17260..17424
DNA (165bp) protein (55aa)

This feature has no annotations

L3_098_220G1_scaffold_146_16
Bacillus sp. TH008, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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17472..17873
DNA (402bp) protein (134aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Brevibacillus laterosporus PE36 RepID=U4WL81_BRELA
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KKB74201.1}; TaxID=1609979 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. TH008.;"
hypothetical protein
L3_098_220G1_scaffold_146_17
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18519..19847
DNA (1329bp) protein (443aa)
Amino acid permease n=1 Tax=Clostridium sp. CAG:221 RepID=R6GPR2_9CLOT
Amino acid permease {ECO:0000313|EMBL:CDB16142.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
amino acid permease
L3_098_220G1_scaffold_146_18
unknown

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20015..20773
DNA (759bp) protein (253aa)

This feature has no annotations

L3_098_220G1_scaffold_146_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20878..21666)
DNA (789bp) protein (263aa)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UYR8_CLOBA
HisJ family histidinol phosphate phosphatase
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EES49952.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_098_220G1_scaffold_146_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21823..22287
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TL03_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24552.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_098_220G1_scaffold_146_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22513..22695
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V3D9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07319.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_098_220G1_scaffold_146_22
unknown

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22854..22988
DNA (135bp) protein (45aa)

This feature has no annotations

L3_098_220G1_scaffold_146_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23492..25030
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KB52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN40261.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_098_220G1_scaffold_146_24
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25045..25725
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J562_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29299.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L3_098_220G1_scaffold_146_25
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26182..29109
DNA (2928bp) protein (976aa)
Putative ATP-dependent helicase DinG {ECO:0000313|EMBL:AGF56862.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AGF56862.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
dinG; putative ATP-dependent helicase DinG (EC:3.6.4.12)
Putative ATP-dependent helicase DinG n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MZT0_9CLOT
L3_098_220G1_scaffold_146_26
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29461..29949
DNA (489bp) protein (163aa)
NH2-acetyltransferase n=3 Tax=Clostridium acetobutylicum RepID=F0KEK8_CLOAE
Uncharacterized protein {ECO:0000313|EMBL:KAJ53032.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
NH2-acetyltransferase
L3_098_220G1_scaffold_146_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30180..31565
DNA (1386bp) protein (462aa)
MATE efflux family protein n=1 Tax=Clostridium botulinum RepID=R4NNF4_CLOBO
MATE efflux family protein {ECO:0000313|EMBL:AIY79399.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
mate efflux family protein
L3_098_220G1_scaffold_146_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31958..33280
DNA (1323bp) protein (441aa)
UPI0003D59D11 related cluster n=1 Tax=unknown RepID=UPI0003D59D11
Purine permease {ECO:0000313|EMBL:KHD17212.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
xanthine permease
L3_098_220G1_scaffold_146_29
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33311..33880
DNA (570bp) protein (190aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Xanthine phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=M8J9W2_CLOBU
xanthine phosphoribosyltransferase
L3_098_220G1_scaffold_146_30
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34036..36249)
DNA (2214bp) protein (738aa)
Cell wall hydrolase/autolysin n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7B2_9CLOT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EHJ02091.1}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
cell wall hydrolase/autolysin
Displaying items 1-30 of 45 in total

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