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L3_098_220G1_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_165_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(163..381)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M190_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99966.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_098_220G1_scaffold_165_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(419..643)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U333_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AJG99821.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L3_098_220G1_scaffold_165_3
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

854..1693
DNA (840bp) protein (280aa)
LPS:glycosyltransferase n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A6S1_DESDJ
LPS:glycosyltransferase
LPS:glycosyltransferase {ECO:0000313|EMBL:AFL99655.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L3_098_220G1_scaffold_165_4
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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1990..2343
DNA (354bp) protein (118aa)
Putative cytochrome b5-like Heme/Steroid binding domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CY72_9FIRM
Putative cytochrome b5-like Heme/Steroid binding domain protein {ECO:0000313|EMBL:ERI89520.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L3_098_220G1_scaffold_165_5
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2375..2902
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CG80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI89519.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L3_098_220G1_scaffold_165_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3049..3447)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5G0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99915.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_098_220G1_scaffold_165_7
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3836..4441
DNA (606bp) protein (202aa)
50S ribosomal protein L25 n=1 Tax=Clostridium sp. CAG:221 RepID=R6GPZ2_9CLOT
hypothetical protein
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_098_220G1_scaffold_165_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4551..5279)
DNA (729bp) protein (243aa)
Exonuclease, RNase T and DNA polymerase III n=2 Tax=Clostridium botulinum B RepID=B2TM92_CLOBB
exonuclease
Putative exonuclease {ECO:0000313|EMBL:CDH90925.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_098_220G1_scaffold_165_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5591..5941)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T8F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56118.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_098_220G1_scaffold_165_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6256..6603
DNA (348bp) protein (116aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QVE7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54375.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_098_220G1_scaffold_165_11
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6910..7197
DNA (288bp) protein (96aa)
GTP cyclohydrolase II n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FWM6_CLOPA
GTP cyclohydrolase II {ECO:0000313|EMBL:ETD67842.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L3_098_220G1_scaffold_165_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7523..8209
DNA (687bp) protein (229aa)
haloacid dehalogenase n=1 Tax=Clostridium beijerinckii RepID=UPI0002E9710C
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AJH02044.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_098_220G1_scaffold_165_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8619..10712
DNA (2094bp) protein (698aa)
glnA2; glutamine synthetase GlnA (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXF2_9CLOT
Glutamine synthetase {ECO:0000313|EMBL:EKQ50898.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_098_220G1_scaffold_165_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10773..11975)
DNA (1203bp) protein (401aa)
Sodium/glutamate symporter n=2 Tax=Clostridium butyricum RepID=M8JDS6_CLOBU
Sodium/glutamate symporter {ECO:0000313|EMBL:ENZ32312.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sodium/glutamate symporter
L3_098_220G1_scaffold_165_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12128..13792)
DNA (1665bp) protein (555aa)
Protein kinase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LUR9_CLOB8
protein kinase
Protein kinase {ECO:0000313|EMBL:ABR34099.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_098_220G1_scaffold_165_16
unknown

Not on your lists

comp(13930..14073)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_098_220G1_scaffold_165_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14187..14939
DNA (753bp) protein (251aa)
Ricin B lectin n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSY2_CLOSA
ricin B lectin
Ricin B lectin {ECO:0000313|EMBL:AGX43638.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_220G1_scaffold_165_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15141..16709
DNA (1569bp) protein (523aa)
beta-hexosaminidase (EC:3.2.1.52)
beta-N-acetylhexosaminidase n=1 Tax=Clostridium botulinum RepID=UPI000381F8C3
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:KIL09600.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_098_220G1_scaffold_165_19
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16966..17895
DNA (930bp) protein (310aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9ST63_CLOC7
Exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:ADL50679.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_098_220G1_scaffold_165_20
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18131..18241
DNA (111bp) protein (37aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MMA1_9CLOT
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AGF55881.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_165_21
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18284..18616
DNA (333bp) protein (111aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MMA1_9CLOT
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AGF55881.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_165_22
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19067..19219)
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5MYZ8_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH06877.1}; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
L3_098_220G1_scaffold_165_23
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19303..19572)
DNA (270bp) protein (90aa)
Transposase mutator type n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SM63_CLOC7
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:ADL51794.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_098_220G1_scaffold_165_24
Carnobacterium maltaromaticum, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20040..21017)
DNA (978bp) protein (326aa)
Bacterial regulatory s, lacI family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E1Z9_CARML
scrR; bacterial regulatory s, lacI family protein
Bacterial regulatory s, lacI family protein {ECO:0000313|EMBL:CCO09977.2}; TaxID=1234679 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium maltaromaticum LMA28.;"
L3_098_220G1_scaffold_165_25
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21176..22582
DNA (1407bp) protein (469aa)
glycoside hydrolase, family 32 (EC:3.2.1.-)
Glycosyl hydrolase family 32 n=1 Tax=Enterococcus faecium R497 RepID=J5WF66_ENTFC
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EJX51282.1}; TaxID=1134837 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R497.;"
L3_098_220G1_scaffold_165_26
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22572..24485
DNA (1914bp) protein (638aa)
PTS system protein n=2 Tax=Anaerostipes RepID=E5VQJ6_9FIRM
PTS system protein {ECO:0000313|EMBL:CDC38716.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
PTS system sucrose-specific IIA component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12)
L3_098_220G1_scaffold_165_27
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25002..25187)
DNA (186bp) protein (62aa)
Transposase family protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K7A6_CLOPA
transposase family protein
Transposase family protein {ECO:0000313|EMBL:AGK98612.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_098_220G1_scaffold_165_28
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25660..26637
DNA (978bp) protein (326aa)
Sucrose operon repressor ScrR n=63 Tax=Firmicutes RepID=H8L800_ENTFU
scrR; LacI family transcriptional regulator
Putative ribose operon repressor {ECO:0000313|EMBL:EJX96944.1}; TaxID=1134823 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium ERV168.;"
L3_098_220G1_scaffold_165_29
unknown

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comp(26614..26784)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_098_220G1_scaffold_165_30
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26841..28271
DNA (1431bp) protein (477aa)
Glycosyl hydrolase family 32 n=3 Tax=Lachnospiraceae RepID=E5VLN4_9FIRM
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EFV16221.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Beta-fructosidases (levanase/invertase)
Displaying items 1-30 of 48 in total

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