name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_098_220G1_scaffold_192_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(529..1542)
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Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS98_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43684.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
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L3_098_220G1_scaffold_192_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(1597..2514)
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Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Diaminopimelate epimerase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVX1_9CLOT
dapF; diaminopimelate epimerase
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L3_098_220G1_scaffold_192_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
2656..4386
|
Protein YloA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVL6_CLOSA
yloA; protein YloA
Protein YloA {ECO:0000313|EMBL:AGX43686.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
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L3_098_220G1_scaffold_192_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(4458..5294)
|
Transcriptional regulator, RpiR family n=3 Tax=Clostridium butyricum RepID=B1QW41_CLOBU
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ETI87807.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
transcriptional regulator, RpiR family
|
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L3_098_220G1_scaffold_192_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5510..6673)
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rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2U6_9CLOT
rRNA (Guanine-N(2)-)-methyltransferase {ECO:0000313|EMBL:EHI99598.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
RNA methylase
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L3_098_220G1_scaffold_192_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6702..7271)
|
pyrR; bifunctional protein PyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSA2_CLOSA
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
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L3_098_220G1_scaffold_192_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(7264..8175)
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ylyB; RNA pseudouridine synthase YlyB (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
RNA pseudouridine synthase YlyB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSX0_CLOSA
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L3_098_220G1_scaffold_192_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(8364..9047)
|
DivIVA domain containing protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TAH1_9CLOT
DivIVA domain containing protein {ECO:0000313|EMBL:EKQ56888.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
DivIVA family protein
|
|
L3_098_220G1_scaffold_192_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(9061..9825)
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S4 domain protein n=2 Tax=Clostridium butyricum RepID=B1QW46_CLOBU
RNA-binding protein S4 {ECO:0000313|EMBL:KHD16895.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RNA-binding S4 domain-containing protein
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|
L3_098_220G1_scaffold_192_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(9819..10100)
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Yggt family protein n=2 Tax=Clostridium butyricum RepID=M8JK95_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD16894.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
YGGT family
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L3_098_220G1_scaffold_192_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(10109..10564)
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Cell division protein SepF n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSA5_CLOSA
sepF; cell division protein SepF
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
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L3_098_220G1_scaffold_192_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(10582..11244)
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Pyridoxal phosphate enzyme, YggS family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSX5_CLOSA
pyridoxal phosphate enzyme, YggS family
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:AGX43695.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
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L3_098_220G1_scaffold_192_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(11340..12083)
|
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LTT1_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33761.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
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L3_098_220G1_scaffold_192_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(12080..12457)
|
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW70_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83186.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
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|
L3_098_220G1_scaffold_192_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(12470..13198)
|
Division initiation protein n=4 Tax=Clostridium butyricum RepID=B1QW51_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34279.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
|
|
L3_098_220G1_scaffold_192_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(13296..14048)
|
Cell division protein DivIB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSB0_CLOSA
divIB; cell division protein DivIB
Cell division protein DivIB {ECO:0000313|EMBL:AGX43699.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
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L3_098_220G1_scaffold_192_17
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(14216..15325)
|
Stage V sporulation protein E n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2T2_9CLOT
Stage V sporulation protein E {ECO:0000313|EMBL:EHI99584.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
spoVE2; stage V sporulation protein E
|
|
L3_098_220G1_scaffold_192_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15347..16321)
|
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVN2_CLOSA
|
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L3_098_220G1_scaffold_192_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(16339..17715)
|
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M2T0_9CLOT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
|
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L3_098_220G1_scaffold_192_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(17773..19230)
|
murE2; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT41_CLOSA
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L3_098_220G1_scaffold_192_21
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(19312..21519)
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Stage V sporulation protein D n=2 Tax=Clostridium RepID=A6LTS2_CLOB8
stage V sporulation protein D
Stage V sporulation protein D {ECO:0000313|EMBL:ETD69466.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
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L3_098_220G1_scaffold_192_22
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(21636..22148)
|
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G1D4_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD69467.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
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L3_098_220G1_scaffold_192_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(22203..23135)
|
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVN7_CLOSA
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L3_098_220G1_scaffold_192_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(23148..23576)
|
Protein MraZ n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVY5_9CLOT
cell division protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
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L3_098_220G1_scaffold_192_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(23876..26311)
|
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Clostridium beijerinckii RepID=UPI0003101236
pheT; phenylalanyl-tRNA synthetase subunit beta
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L3_098_220G1_scaffold_192_26
unknown
|
Not on your lists |
comp(26549..26665)
|
This feature has no annotations |
|
L3_098_220G1_scaffold_192_27
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(26863..27882)
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Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Clostridium RepID=SYFA_CLOB8
pheS; phenylalanyl-tRNA synthetase subunit alpha
|
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L3_098_220G1_scaffold_192_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(28248..29036)
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ysgA; tRNA/rRNA methyltransferase YsgA (EC:2.1.1.-)
tRNA/rRNA methyltransferase YsgA {ECO:0000313|EMBL:AGX43710.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGX43710.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
tRNA/rRNA methyltransferase YsgA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSY8_CLOSA
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L3_098_220G1_scaffold_192_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(29047..29727)
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Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97614.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
potassium uptake protein
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L3_098_220G1_scaffold_192_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(29732..31075)
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Potassium uptake protein, TrkH family n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URL8_CLOBO
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EES49298.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
TrkH family potassium uptake protein
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