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L3_098_220G1_scaffold_209

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_209_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(136..1734)
DNA (1599bp) protein (533aa)
Putative Pyridine nucleotide-disulphide oxidoreductase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPI3_9CLOT
Putative Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:CDG03052.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
FAD-dependent dehydrogenase
L3_098_220G1_scaffold_209_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1796..3085)
DNA (1290bp) protein (430aa)
YbbR-like protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLE1_9CLOT
YbbR-like protein {ECO:0000313|EMBL:EKY28545.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_220G1_scaffold_209_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3052..3909)
DNA (858bp) protein (286aa)
TIGR00159 family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKS7_9CLOT
TIGR00159 family protein {ECO:0000313|EMBL:EKY28546.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
disA bacterial checkpoint controller nucleotide-binding family protein
L3_098_220G1_scaffold_209_4
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4078..5106
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KMS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74815.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
L3_098_220G1_scaffold_209_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5180..5752
DNA (573bp) protein (191aa)
Spore cortex-lytic enzyme domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKM8_9CLOT
Spore cortex-lytic enzyme domain protein {ECO:0000313|EMBL:EKY28549.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
spore-cortex-lytic enzyme, sleb
L3_098_220G1_scaffold_209_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6006..7625)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJV6_9CLOT
phosphoenolpyruvate-protein phosphotransferase
L3_098_220G1_scaffold_209_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8048..9082)
DNA (1035bp) protein (345aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
nrdB; ribonucleoside-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIU3_9CLOT
L3_098_220G1_scaffold_209_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9282..11513)
DNA (2232bp) protein (744aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
nrdA; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJK0_9CLOT
L3_098_220G1_scaffold_209_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11828..12685
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27839.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_220G1_scaffold_209_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12759..13316)
DNA (558bp) protein (186aa)
fumB; fumarate hydratase class I, anaerobic (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIQ1_9CLOT
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EKY27838.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_098_220G1_scaffold_209_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13330..14172)
DNA (843bp) protein (281aa)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJV3_9CLOT
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EKY27837.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
fumarate hydratase
L3_098_220G1_scaffold_209_12
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14335..15030)
DNA (696bp) protein (232aa)
N-acetylmuramoyl-L-alanine amidase CwlD n=1 Tax=Clostridium sp. CAG:265 RepID=R6KI17_9CLOT
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:CDB74803.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
N-acetylmuramoyl-L-alanine amidase CwlD
L3_098_220G1_scaffold_209_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15125..16735)
DNA (1611bp) protein (537aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIK6_9CLOT
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EKY27834.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Na/Pi-cotransporter family protein/PhoU family protein
L3_098_220G1_scaffold_209_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16935..17327)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPG9_9CLOT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rpsI; 30S ribosomal protein S9
L3_098_220G1_scaffold_209_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17354..17788)
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJU9_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rplM; 50S ribosomal protein L13
L3_098_220G1_scaffold_209_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17953..18690)
DNA (738bp) protein (246aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIT3_9CLOT
L3_098_220G1_scaffold_209_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18713..19510)
DNA (798bp) protein (266aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJJ1_9CLOT
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
cbiQ1; cobalt transporter permease protein CbiQ
L3_098_220G1_scaffold_209_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19530..20381)
DNA (852bp) protein (284aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIK2_9CLOT
cbiO; cobalt transporter ATP-binding subunit
L3_098_220G1_scaffold_209_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20366..21205)
DNA (840bp) protein (280aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIP6_9CLOT
ABC transporter family protein
L3_098_220G1_scaffold_209_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21421..21762)
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=1 Tax=Clostridium sp. CAG:221 RepID=R6G050_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
rplQ; 50S ribosomal protein L17
L3_098_220G1_scaffold_209_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21775..22722)
DNA (948bp) protein (316aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIS8_9CLOT
L3_098_220G1_scaffold_209_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22826..23446)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJI9_9CLOT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpsD; ribosomal protein S4
L3_098_220G1_scaffold_209_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23478..23873)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIJ6_9CLOT
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpsK; 30S ribosomal protein S11
L3_098_220G1_scaffold_209_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23889..24257)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIP0_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpsM; 30S ribosomal protein S13
L3_098_220G1_scaffold_209_25
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24473..24586)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Clostridiales RepID=R7IGE9_9FIRM
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_098_220G1_scaffold_209_26
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24629..24847)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=Clostridium RepID=L1QIS4_9CLOT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
infA; translation initiation factor IF-1
L3_098_220G1_scaffold_209_27
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25220..25969)
DNA (750bp) protein (250aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KHZ3_9CLOT
L3_098_220G1_scaffold_209_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25969..26619)
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Adenylate kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJT4_9CLOT
adenylate kinase family protein
L3_098_220G1_scaffold_209_29
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26642..27919)
DNA (1278bp) protein (426aa)
Protein translocase subunit SecY n=1 Tax=Clostridium sp. CAG:221 RepID=R6GL60_9CLOT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
secY; preprotein translocase, SecY subunit
L3_098_220G1_scaffold_209_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27921..28361)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIN1_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rplO; 50S ribosomal protein L15
Displaying items 1-30 of 50 in total

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