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L3_098_220G1_scaffold_272

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_272_1
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(291..1394)
DNA (1104bp) protein (368aa)
transaldolase (EC:2.2.1.2)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
Transaldolase n=4 Tax=Bifidobacterium RepID=B6XTJ7_9BIFI
L3_098_220G1_scaffold_272_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1487..3595)
DNA (2109bp) protein (703aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29182.1}; Transketolase {ECO:0000313|EMBL:KFI63073.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KFI63073.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Transketolase n=2 Tax=Bifidobacterium RepID=C0BTI1_9BIFI
transketolase
L3_098_220G1_scaffold_272_3
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3931..5064
DNA (1134bp) protein (378aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTJ4_9BIFI
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
HrcA family transcriptional regulator
L3_098_220G1_scaffold_272_4
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5118..6269
DNA (1152bp) protein (384aa)
Chaperone protein DnaJ n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTJ3_9BIFI
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
molecular chaperone DnaJ
L3_098_220G1_scaffold_272_5
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6439..7233)
DNA (795bp) protein (265aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29185.1}; Fructosamine kinase {ECO:0000313|EMBL:KFI63070.1}; EC=2.7.1.172 {ECO:0000313|EMBL:KFI63070.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Fructosamine kinase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTJ2_9BIFI
fructosamine kinase
L3_098_220G1_scaffold_272_6
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7430..8314
DNA (885bp) protein (295aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Undecaprenyl-diphosphatase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTJ1_9BIFI
UDP-diphosphatase
L3_098_220G1_scaffold_272_7
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8414..9238)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTJ0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI63068.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
hypothetical protein
L3_098_220G1_scaffold_272_8
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9550..9918)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTI8_9BIFI
Anaerobic C4-dicarboxylate transport protein {ECO:0000313|EMBL:KFI63063.1}; Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29190.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
hypothetical protein
L3_098_220G1_scaffold_272_9
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10028..10651)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTI7_9BIFI
MerR family transcriptional regulator {ECO:0000313|EMBL:KFI63062.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
transcriptional regulator
L3_098_220G1_scaffold_272_10
unknown

Not on your lists

10683..11015
DNA (333bp) protein (111aa)

This feature has no annotations

L3_098_220G1_scaffold_272_11
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11272..11526)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BTJ0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI63060.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
hypothetical protein
L3_098_220G1_scaffold_272_12
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11571..11702)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTF7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21778.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_098_220G1_scaffold_272_13
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11869..12036
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI63058.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L3_098_220G1_scaffold_272_14
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12391..12741
DNA (351bp) protein (117aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29196.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L3_098_220G1_scaffold_272_15
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12738..13892)
DNA (1155bp) protein (385aa)
Adenine-specific methyltransferase n=2 Tax=Bifidobacterium longum RepID=S3DLW9_BIFLN
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29197.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
phage DNA methylase
L3_098_220G1_scaffold_272_16
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13942..14691
DNA (750bp) protein (250aa)
inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PEV3_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29198.1}; Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:KFI66212.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L3_098_220G1_scaffold_272_17
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15269..16468)
DNA (1200bp) protein (400aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29200.1}; Lactaldehyde reductase {ECO:0000313|EMBL:KFI66213.1}; EC=1.1.1.2 {ECO:0000313|EMBL:KFI66213.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Alcohol dehydrogenase, iron-dependent n=2 Tax=Bifidobacterium RepID=C0BQ50_9BIFI
alcohol dehydrogenase
L3_098_220G1_scaffold_272_18
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16497..18233)
DNA (1737bp) protein (579aa)
Putative secreted protein {ECO:0000313|EMBL:KFI66214.1}; EC=3.1.1.53 {ECO:0000313|EMBL:KFI66214.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8P0_9BIFI
Sialic acid-specific 9-O-acetylesterase
L3_098_220G1_scaffold_272_19
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18495..19814)
DNA (1320bp) protein (440aa)
Integrase core domain-containing protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8ARM6_BIFLN
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29202.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
integrase core domain-containing protein
L3_098_220G1_scaffold_272_20
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20083..22539)
DNA (2457bp) protein (819aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Endo-1,4-beta-xylanase n=1 Tax=Bifidobacterium animalis subsp. lactis ATCC 27673 RepID=U3Q8B8_BIFAN
endo-1,4-beta-xylanase
L3_098_220G1_scaffold_272_21
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22724..23851)
DNA (1128bp) protein (376aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29205.1}; Xylanase Y {ECO:0000313|EMBL:KFI61951.1}; EC=3.2.1.156 {ECO:0000313|EMBL:KFI61951.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Glycosyl hydrolase family 8 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQ52_9BIFI
xylanase Y
L3_098_220G1_scaffold_272_22
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23893..24099)
DNA (207bp) protein (69aa)
Carboxylesterase n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FGU3_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29206.1}; Esterase {ECO:0000313|EMBL:KFI61950.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
esterase
L3_098_220G1_scaffold_272_23
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24121..24981)
DNA (861bp) protein (287aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Carboxylesterase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BQK0_9BIFI
putative carboxylesterase
L3_098_220G1_scaffold_272_24
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25038..25364)
DNA (327bp) protein (109aa)
Carboxylesterase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XWY2_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29208.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
esterase
L3_098_220G1_scaffold_272_25
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25856..26899
DNA (1044bp) protein (348aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBH3_BIFLI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29209.1}; LacI family transcriptional regulator {ECO:0000313|EMBL:KFI60913.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
periplasmic-binding protein/LacI transcriptional regulator
L3_098_220G1_scaffold_272_26
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27133..28233
DNA (1101bp) protein (367aa)
Transposase n=1 Tax=Dermacoccus sp. Ellin185 RepID=E3B5Y4_9MICO
Transposase {ECO:0000313|EMBL:KFI61493.1}; Flags: Fragment;; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
transposase
L3_098_220G1_scaffold_272_27
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28203..29090)
DNA (888bp) protein (296aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29211.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L3_098_220G1_scaffold_272_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29123..29692
DNA (570bp) protein (190aa)
Exonuclease, RNase T and DNA polymerase III n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GR95_BIFLS
hypothetical protein
Exonuclease, RNase T and DNA polymerase III {ECO:0000313|EMBL:ACJ52325.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Displaying 28 items

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