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L3_098_220G1_scaffold_299

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_299_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..5464)
DNA (5463bp) protein (1821aa)
Carbohydrate binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FMM9_9CLOT
Carbohydrate binding domain protein {ECO:0000313|EMBL:EEA82710.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate binding family 6
L3_098_220G1_scaffold_299_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6357..6917)
DNA (561bp) protein (187aa)
UPI0003D693EB related cluster n=1 Tax=unknown RepID=UPI0003D693EB
Uncharacterized protein {ECO:0000313|EMBL:ETI88476.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
transcriptional regulator
L3_098_220G1_scaffold_299_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6907..8085)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH91_CLOBU
MFS transporter {ECO:0000313|EMBL:KHD15084.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
major facilitator family protein
L3_098_220G1_scaffold_299_4
unknown

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comp(8511..9002)
DNA (492bp) protein (164aa)

This feature has no annotations

L3_098_220G1_scaffold_299_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9155..9823)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27331.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
nitroreductase family protein
L3_098_220G1_scaffold_299_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9860..10258)
DNA (399bp) protein (133aa)
Transcriptional regulator, ArsR family n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAP9_9FIRM
bacterial regulatory , arsR family protein
Bacterial regulatory, arsR family protein {ECO:0000313|EMBL:AIY83055.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_098_220G1_scaffold_299_7
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10287..11105)
DNA (819bp) protein (273aa)
Beta-lactamase domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMW9_DESAA
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:CDM68012.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_098_220G1_scaffold_299_8
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11496..11957)
DNA (462bp) protein (154aa)
BadM/Rrf2 family transcriptional regulator n=2 Tax=Staphylococcus warneri RepID=L7WY12_STAWS
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EEQ80555.1}; TaxID=596319 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri L37603.;"
L3_098_220G1_scaffold_299_9
Streptococcus gallolyticus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(11973..12542)
DNA (570bp) protein (190aa)
NAD-binding protein {ECO:0000313|EMBL:CDO18298.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CDO18298.1};; TaxID=315405 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus gallolyticus.;"
Uncharacterized protein n=4 Tax=Streptococcus gallolyticus RepID=D3HDS7_STRG3
NAD dependent epimerase/dehydratase
L3_098_220G1_scaffold_299_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12673..14214)
DNA (1542bp) protein (514aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8K8Z3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35613.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter ATP-binding protein
L3_098_220G1_scaffold_299_11
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15011..15508)
DNA (498bp) protein (166aa)
Putative Fe-S oxidoreductase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KG43_CLOPA
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AGK98575.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_098_220G1_scaffold_299_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15764..16357
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0002E536A5
Putative lipoprotein {ECO:0000313|EMBL:AIY79081.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
lipoprotein
L3_098_220G1_scaffold_299_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16650..17381)
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R250_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54021.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_098_220G1_scaffold_299_14
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17849..18967)
DNA (1119bp) protein (373aa)
hydrogenase n=1 Tax=Zymophilus raffinosivorans RepID=UPI00037E33C9
oxidoreductase/nitrogenase component 1
Oxidoreductase/nitrogenase component 1 {ECO:0000313|EMBL:CDM67479.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_098_220G1_scaffold_299_15
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18992..20524)
DNA (1533bp) protein (511aa)
nitrogenase n=1 Tax=Zymophilus raffinosivorans RepID=UPI000365EE3D
nitrogenase
Nitrogenase {ECO:0000313|EMBL:AIQ11441.1}; TaxID=44251 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus (Paenibacillus azotofixans).;"
L3_098_220G1_scaffold_299_16
unknown

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comp(20704..20874)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_098_220G1_scaffold_299_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21861..22010)
DNA (150bp) protein (50aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0C8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87986.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_098_220G1_scaffold_299_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22247..22780)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00030E2DE0
Uncharacterized protein {ECO:0000313|EMBL:KIL08010.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
3D domain-containing protein
L3_098_220G1_scaffold_299_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23078..23371
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUY1_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43436.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_220G1_scaffold_299_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23427..24269)
DNA (843bp) protein (281aa)
Flagellin n=5 Tax=Clostridium butyricum RepID=B1QX69_CLOBU
Flagellin {ECO:0000313|EMBL:KHD15787.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
flagellin domain-containing protein
L3_098_220G1_scaffold_299_21
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24401..24559)
DNA (159bp) protein (53aa)
Acriflavin resistance protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TK75_ALKMQ
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABR46593.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L3_098_220G1_scaffold_299_22
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24615..24872)
DNA (258bp) protein (86aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TK74_ALKMQ
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABR46592.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
L3_098_220G1_scaffold_299_23
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25109..25702
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MHY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF28177.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
transcriptional regulator, TetR family
L3_098_220G1_scaffold_299_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25759..26247)
DNA (489bp) protein (163aa)
Putative transcription factor YdeB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQ58_CLOSA
ydeB1; putative transcription factor YdeB
Putative transcription factor YdeB {ECO:0000313|EMBL:AGX42725.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_220G1_scaffold_299_25
unknown

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comp(26750..26818)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 25 items

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