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L3_098_220G1_scaffold_300

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_300_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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802..1263
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M879_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54159.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_300_2
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1272..1487
DNA (216bp) protein (72aa)
Transcriptional regulator, XRE family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LMY2_9CLOT
transcriptional regulator, XRE family
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AGF54160.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_300_3
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1487..2932
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MGT2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54161.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_300_4
unknown

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comp(2929..3162)
DNA (234bp) protein (78aa)

This feature has no annotations

L3_098_220G1_scaffold_300_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3275..3946
DNA (672bp) protein (224aa)
UPI0003D5F2CE related cluster n=1 Tax=unknown RepID=UPI0003D5F2CE
5'-nucleotidase {ECO:0000313|EMBL:ETI91432.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
putative phosphatase
L3_098_220G1_scaffold_300_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4441..4758)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000309C487
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD21861.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_098_220G1_scaffold_300_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4900..5133
DNA (234bp) protein (78aa)
UPI0003D66482 related cluster n=1 Tax=unknown RepID=UPI0003D66482
Uroporphyrinogen decarboxylase {ECO:0000313|EMBL:ETI90196.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_098_220G1_scaffold_300_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5269..5556)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TV82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ51351.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_098_220G1_scaffold_300_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5587..6333)
DNA (747bp) protein (249aa)
UPI0003D63C75 related cluster n=1 Tax=unknown RepID=UPI0003D63C75
ExsB family protein {ECO:0000313|EMBL:ETI91441.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ttcA2; tRNA 2-thiocytidine biosynthesis protein TtcA
L3_098_220G1_scaffold_300_10
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6753..7073
DNA (321bp) protein (107aa)
Putative arsenical resistance operon repressor ArsR n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KWW1_CLOBM
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGK87740.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
arsenical resistance operon repressor
L3_098_220G1_scaffold_300_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7129..9399
DNA (2271bp) protein (757aa)
gshAB; bifunctional glutamate--cysteine ligase/glutathione synthetase (EC:6.3.2.2 6.3.2.3)
Glutathione biosynthesis bifunctional protein GshAB n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0L8_CLOBA
Glutathione biosynthesis bifunctional protein GshAB {ECO:0000256|HAMAP-Rule:MF_00782}; Gamma-GCS-GS {ECO:0000256|HAMAP-Rule:MF_00782}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_098_220G1_scaffold_300_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9638..10030)
DNA (393bp) protein (131aa)
Hemerythrin-like metal-binding protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MC12_9CLOT
Hemerythrin-like metal-binding protein {ECO:0000313|EMBL:EHI97540.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hemerythrin-like metal-binding protein
L3_098_220G1_scaffold_300_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10163..11941
DNA (1779bp) protein (593aa)
Oligoendopeptidase, pepF/M3 family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N6C4_9CLOT
oligoendopeptidase, pepF/M3 family
Oligoendopeptidase, pepF/M3 family {ECO:0000313|EMBL:AGF58962.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_220G1_scaffold_300_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11980..12522
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z3R9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34300.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane-associated phospholipid phosphatase
L3_098_220G1_scaffold_300_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13037..14470)
DNA (1434bp) protein (478aa)
ansB1; aspartate ammonia-lyase AnsB (EC:4.3.1.1)
Aspartate ammonia-lyase AnsB {ECO:0000313|EMBL:AGX42528.1}; EC=4.3.1.1 {ECO:0000313|EMBL:AGX42528.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Aspartate ammonia-lyase AnsB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPU1_CLOSA
L3_098_220G1_scaffold_300_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15050..15508
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SYK0_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ51458.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
transcriptional regulator
L3_098_220G1_scaffold_300_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15630..15860
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56240.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_098_220G1_scaffold_300_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16061..16795)
DNA (735bp) protein (245aa)
Regulatory protein GntR, HTH n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRM0_CLOSA
regulatory protein GntR, HTH
Regulatory protein GntR, HTH {ECO:0000313|EMBL:AGX43409.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_220G1_scaffold_300_19
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17101..17880
DNA (780bp) protein (260aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Uridine phosphorylase n=2 Tax=Clostridium RepID=A6LY35_CLOB8
uridine phosphorylase
L3_098_220G1_scaffold_300_20
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17922..18314
DNA (393bp) protein (131aa)
cdd2; cytidine deaminase Cdd (EC:3.5.4.5)
Cytidine deaminase Cdd {ECO:0000313|EMBL:AGF58435.1}; EC=3.5.4.5 {ECO:0000313|EMBL:AGF58435.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Cytidine deaminase Cdd n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LYR4_9CLOT
L3_098_220G1_scaffold_300_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18438..19628
DNA (1191bp) protein (397aa)
deoB; phosphopentomutase DeoB (EC:5.4.2.7)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Phosphopentomutase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS51_CLOSA
L3_098_220G1_scaffold_300_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19677..20354
DNA (678bp) protein (226aa)
membrane protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002EDAA84
Membrane-like protein {ECO:0000313|EMBL:AJH00080.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
membrane -like protein
L3_098_220G1_scaffold_300_23
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20489..21202
DNA (714bp) protein (238aa)
deoD2; purine nucleoside phosphorylase DeoD-type (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N4Q2_9CLOT
L3_098_220G1_scaffold_300_24
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21241..22278
DNA (1038bp) protein (346aa)
Basic membrane lipoprotein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LY30_CLOB8
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:ABR35260.1}; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_098_220G1_scaffold_300_25
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22407..23957
DNA (1551bp) protein (517aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DGK9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI95483.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
ABC transporter
L3_098_220G1_scaffold_300_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23932..25056
DNA (1125bp) protein (375aa)
Inner-membrane translocator n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LY28_CLOB8
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABR35258.1}; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_098_220G1_scaffold_300_27
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25050..25970
DNA (921bp) protein (307aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DFC0_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ERI95485.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
inner-membrane translocator
L3_098_220G1_scaffold_300_28
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26146..26796
DNA (651bp) protein (217aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Probable transaldolase n=3 Tax=Clostridium RepID=A6LW16_CLOB8
transaldolase
Displaying 28 items

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