ggKbase home page

L3_098_220G1_scaffold_357

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_357_1
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..138
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TYY4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF79939.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
L3_098_220G1_scaffold_357_2
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(486..1196)
DNA (711bp) protein (237aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
Uracil-DNA glycosylase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B9V2_9ACTO
uracil-DNA glycosylase
L3_098_220G1_scaffold_357_3
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1331..1873
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B9V1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EDN79975.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
hypothetical protein
L3_098_220G1_scaffold_357_4
unknown

Not on your lists

2649..2951
DNA (303bp) protein (101aa)

This feature has no annotations

L3_098_220G1_scaffold_357_5
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3133..4761
DNA (1629bp) protein (543aa)
60 kDa chaperonin n=1 Tax=Actinomyces sp. ICM39 RepID=J3J5N9_9ACTO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
groEL; chaperonin GroEL
L3_098_220G1_scaffold_357_6
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4898..5191)
DNA (294bp) protein (98aa)
WXG100 family type VII secretion target n=2 Tax=Actinomyces odontolyticus RepID=A7B9U9_9ACTO
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
type VII secretion protein
L3_098_220G1_scaffold_357_7
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5494..6456)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZAW0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC96432.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
hypothetical protein
L3_098_220G1_scaffold_357_8
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6632..8098)
DNA (1467bp) protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
histidine kinase (EC:2.7.13.3)
GHKL domain protein n=1 Tax=Actinomyces sp. ICM39 RepID=J2ZAX1_9ACTO
L3_098_220G1_scaffold_357_9
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8100..8822)
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B9U6_9ACTO
Response regulator receiver domain protein {ECO:0000313|EMBL:EDN79970.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
two component transcriptional regulator, winged helix family
L3_098_220G1_scaffold_357_10
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8979..9452
DNA (474bp) protein (158aa)
Uncharacterized protein n=2 Tax=Actinomyces RepID=D4TYX2_9ACTO
PH domain protein {ECO:0000313|EMBL:EJN45815.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
membrane-flanked domain-containing protein
L3_098_220G1_scaffold_357_11
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9449..11008
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TYX1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFF79926.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
membrane-flanked domain-containing protein
L3_098_220G1_scaffold_357_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11034..11921
DNA (888bp) protein (296aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Actinomyces sp. ICM39 RepID=J2YPU2_9ACTO
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:EWC96426.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
NAD(P) dependent dehydrogenase
L3_098_220G1_scaffold_357_13
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12053..13006
DNA (954bp) protein (318aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B9U2_9ACTO
L3_098_220G1_scaffold_357_14
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13003..13437
DNA (435bp) protein (145aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TYW8_9ACTO
L3_098_220G1_scaffold_357_15
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13622..14500
DNA (879bp) protein (293aa)
ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KTZ3_9ACTO
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:EFU60626.1}; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 180 str. F0310.;"
sugar ABC transporter permease
L3_098_220G1_scaffold_357_16
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14487..15332
DNA (846bp) protein (282aa)
ABC transporter, permease protein n=1 Tax=Actinomyces sp. ICM39 RepID=J3EFX0_9ACTO
ABC transporter, permease protein {ECO:0000313|EMBL:EJN45814.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
sugar ABC transporter permease
L3_098_220G1_scaffold_357_17
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15363..16685
DNA (1323bp) protein (441aa)
Sugar ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KTZ5_9ACTO
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EWC96427.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
sugar ABC transporter
L3_098_220G1_scaffold_357_18
Actinomyces sp. ICM39, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16754..17449
DNA (696bp) protein (232aa)
N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Actinomyces sp. ICM39 RepID=J2YPT0_9ACTO
N-acetylglucosaminylphosphatidylinositol deacetylase {ECO:0000313|EMBL:EJN45802.1}; TaxID=1105029 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM39.;"
LmbE family protein
L3_098_220G1_scaffold_357_19
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17456..18829)
DNA (1374bp) protein (458aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFU60630.1}; EC=3.2.1.86 {ECO:0000313|EMBL:EFU60630.1};; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 180 str. F0310.;"
6-phospho-beta-glucosidase n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KTZ7_9ACTO
6-phospho-beta-glucosidase
L3_098_220G1_scaffold_357_20
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18906..19793
DNA (888bp) protein (296aa)
Possible fructokinase {ECO:0000313|EMBL:EFU60631.1}; EC=2.7.1.4 {ECO:0000313|EMBL:EFU60631.1};; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 180 str. F0310.;"
Possible fructokinase n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KTZ8_9ACTO
fructokinase
L3_098_220G1_scaffold_357_21
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19850..21469
DNA (1620bp) protein (540aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
Lysine--tRNA ligase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B9T4_9ACTO
lysyl-tRNA synthetase
L3_098_220G1_scaffold_357_22
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21553..22353)
DNA (801bp) protein (267aa)
Putative sugar-binding domain protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TYW0_9ACTO
Putative sugar-binding domain protein {ECO:0000313|EMBL:EFF79915.1}; TaxID=649742 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus F0309.;"
DeoR family transcriptional regulator
Displaying 22 items

View Taxonomy