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L3_098_220G1_scaffold_366

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_366_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..112)
DNA (111bp) protein (37aa)
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=7 Tax=Bifidobacterium bifidum RepID=E4NYR6_BIFBP
L3_098_220G1_scaffold_366_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(172..1137)
DNA (966bp) protein (322aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW48_BIFLJ
1,4-dihydroxy-2-naphthoate octaprenyltransferase
L3_098_220G1_scaffold_366_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1200..2882)
DNA (1683bp) protein (561aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Lysine--tRNA ligase n=3 Tax=Bifidobacterium longum subsp. longum RepID=F8ASK7_BIFLN
lysU; lysu
L3_098_220G1_scaffold_366_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3382..4572
DNA (1191bp) protein (397aa)
Arabinose efflux permease n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DC05_BIFLN
Arabinose efflux permease {ECO:0000313|EMBL:KFI73677.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Arabinose efflux permease
L3_098_220G1_scaffold_366_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4659..7112
DNA (2454bp) protein (818aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW51_BIFLJ
Tetratricopeptide repeat-containing protein {ECO:0000313|EMBL:KFI73676.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_098_220G1_scaffold_366_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7188..7820
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQI1_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KFI73675.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_098_220G1_scaffold_366_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7928..9529)
DNA (1602bp) protein (534aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase n=2 Tax=Bifidobacterium longum RepID=B3DQI0_BIFLD
dppX2; dipeptidyl aminopeptidase/acylaminoacyl-peptidase
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase {ECO:0000313|EMBL:ACD99218.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_098_220G1_scaffold_366_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9617..10306)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN72_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ53228.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_098_220G1_scaffold_366_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10336..11412)
DNA (1077bp) protein (359aa)
Phage shock protein C, PspC n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW55_BIFLJ
phage shock protein C
Phage shock protein C, PspC {ECO:0000313|EMBL:ADH01112.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_098_220G1_scaffold_366_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12204..13451
DNA (1248bp) protein (416aa)
Putative signal transduction histidine kinase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN74_BIFLS
Putative signal transduction histidine kinase {ECO:0000313|EMBL:KFI73671.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
signal transduction histidine kinase
L3_098_220G1_scaffold_366_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13448..14143
DNA (696bp) protein (232aa)
Response regulator of two-component system n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3V8_BIFLO
response regulator of two-component system
Transcriptional regulator {ECO:0000313|EMBL:KEY26272.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_098_220G1_scaffold_366_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14191..15213)
DNA (1023bp) protein (341aa)
GalE1 n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MX85_9BIFI
UDP-galactose-4-epimerase {ECO:0000313|EMBL:KEY21486.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
UDP-glucose 4-epimerase
L3_098_220G1_scaffold_366_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15282..16829)
DNA (1548bp) protein (516aa)
galT2; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3W0_BIFLO
L3_098_220G1_scaffold_366_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16876..17955)
DNA (1080bp) protein (360aa)
Aminoglycoside phosphotransferase n=2 Tax=Bifidobacterium longum RepID=D6ZW60_BIFLJ
mucin desulfatase
Desulfatase {ECO:0000313|EMBL:KFI73667.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_098_220G1_scaffold_366_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17984..20239)
DNA (2256bp) protein (752aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW61_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH01117.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_098_220G1_scaffold_366_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20456..21100)
DNA (645bp) protein (215aa)
Permease of ABC transporter for sugars n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZW62_BIFLJ
sugar ABC transporter permease
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:KFI73665.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Displaying 16 items

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