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L3_098_220G1_scaffold_376

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_376_1
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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406..1161
DNA (756bp) protein (252aa)
Transcriptional regulator, Sir2 family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV85_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29908.1}; SIR2 family protein {ECO:0000313|EMBL:KFI65336.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
NAD-dependent deacetylase
L3_098_220G1_scaffold_376_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1307..2677)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNA9_BIFLS
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29909.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
ATPase AAA
L3_098_220G1_scaffold_376_3
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2948..3100
DNA (153bp) protein (51aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29910.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L3_098_220G1_scaffold_376_4
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3084..4349)
DNA (1266bp) protein (422aa)
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29911.1}; Threonine dehydratase {ECO:0000313|EMBL:KFI65338.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KFI65338.1};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV84_9BIFI
L3_098_220G1_scaffold_376_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4575..6395)
DNA (1821bp) protein (607aa)
Alpha amylase, catalytic domain protein n=2 Tax=Bifidobacterium RepID=C0BVL6_9BIFI
Alpha-amylase {ECO:0000313|EMBL:KEF29304.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
alpha-amylase
L3_098_220G1_scaffold_376_6
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6797..7681)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTN3_9BIFI
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIZ15294.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_098_220G1_scaffold_376_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7720..8655)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PY07_9BIFI
Sugar ABC transporter permease {ECO:0000313|EMBL:KEF29306.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
sugar ABC transporter permease
L3_098_220G1_scaffold_376_8
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8670..9962)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NQY2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14593.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter substrate-binding protein
L3_098_220G1_scaffold_376_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10161..11372
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P1P8_9BIFI
NagC family transcriptional regulator {ECO:0000313|EMBL:KEF29308.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
NagC family transcriptional regulator
L3_098_220G1_scaffold_376_10
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11556..13868)
DNA (2313bp) protein (771aa)
Alpha-galactosidase {ECO:0000313|EMBL:KFI65347.1}; EC=3.2.1.22 {ECO:0000313|EMBL:KFI65347.1};; Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29923.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Alpha-galactosidase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV95_9BIFI
alpha-galactosidase
L3_098_220G1_scaffold_376_11
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13998..14429)
DNA (432bp) protein (144aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV93_9BIFI
CMP deaminase
L3_098_220G1_scaffold_376_12
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14555..16627
DNA (2073bp) protein (691aa)
Putative Na+/H+ antiporter n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV92_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29925.1}; CPA1 family monovalent cation:proton (H ) antiporter-1 {ECO:0000313|EMBL:KFI65349.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
sodium:proton antiporter
L3_098_220G1_scaffold_376_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17253..18056
DNA (804bp) protein (268aa)
Phospholipase/carboxylesterase {ECO:0000313|EMBL:EEG69901.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEG69901.1};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Phospholipase/carboxylesterase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BVK6_9BIFI
esterase
L3_098_220G1_scaffold_376_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18290..18871
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV90_9BIFI
deoxycytidine triphosphate deaminase
L3_098_220G1_scaffold_376_15
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19114..19236
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV89_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29928.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
truncated transposase
L3_098_220G1_scaffold_376_16
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19426..20301
DNA (876bp) protein (292aa)
Aminotransferase {ECO:0000313|EMBL:KFI65352.1}; EC=4.2.3.134 {ECO:0000313|EMBL:KFI65352.1};; Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ29929.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
Aminotransferase, class III n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XV88_9BIFI
hypothetical protein
L3_098_220G1_scaffold_376_17
unknown

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comp(20128..20787)
DNA (660bp) protein (220aa)

This feature has no annotations

Displaying 17 items

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