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L3_098_220G1_scaffold_393

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_393_1
unknown

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comp(1..141)
DNA (141bp) protein (47aa)

This feature has no annotations

L3_098_220G1_scaffold_393_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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616..1056
DNA (441bp) protein (147aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LR63_CLOB8
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
L3_098_220G1_scaffold_393_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1195..1995)
DNA (801bp) protein (267aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA09_9CLOT
ABC-3 protein {ECO:0000313|EMBL:AJH01388.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
ABC transporter
L3_098_220G1_scaffold_393_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2017..2688)
DNA (672bp) protein (224aa)
Zinc import ATP-binding protein ZnuC n=2 Tax=Clostridium butyricum RepID=B1QXE1_CLOBU
Putative metal ion ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP55715.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
metal transport system ATP-binding protein
L3_098_220G1_scaffold_393_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2773..3189)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1F9_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR36439.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_098_220G1_scaffold_393_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3492..3890
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002D31A11
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJH01380.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_098_220G1_scaffold_393_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4108..5898
DNA (1791bp) protein (597aa)
yjbG; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=2 Tax=Clostridium butyricum RepID=B1QXD4_CLOBU
Oligoendopeptidase F {ECO:0000313|EMBL:ENZ31514.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_098_220G1_scaffold_393_8
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6300..7289
DNA (990bp) protein (330aa)
gluP2; rhomboid protease GluP (EC:3.4.21.105)
Rhomboid protease GluP {ECO:0000313|EMBL:AGF58360.1}; EC=3.4.21.105 {ECO:0000313|EMBL:AGF58360.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Rhomboid protease GluP n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LYL0_9CLOT
L3_098_220G1_scaffold_393_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7289..7903
DNA (615bp) protein (205aa)
Putative membrane protein n=2 Tax=Clostridium butyricum RepID=B1QXD2_CLOBU
Putative membrane protein {ECO:0000313|EMBL:EEP55292.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_098_220G1_scaffold_393_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8078..9424
DNA (1347bp) protein (449aa)
UPI0003D5B0C3 related cluster n=1 Tax=unknown RepID=UPI0003D5B0C3
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
glu/Leu/Phe/Val dehydrogenase, dimerization domain protein
L3_098_220G1_scaffold_393_11
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9785..11179
DNA (1395bp) protein (465aa)
Glycosyl transferase, family 2 n=2 Tax=Clostridium RepID=A6M1F5_CLOB8
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:AJH01377.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_098_220G1_scaffold_393_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11585..13534
DNA (1950bp) protein (650aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:EHJ01539.1}; EC=5.99.1.3 {ECO:0000313|EMBL:EHJ01539.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Clostridium sp. DL-VIII RepID=G7MA00_9CLOT
DNA topoisomerase IV subunit B
L3_098_220G1_scaffold_393_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13681..16572
DNA (2892bp) protein (964aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
DNA topoisomerase IV subunit A n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G543_CLOPA
DNA topoisomerase IV subunit A
L3_098_220G1_scaffold_393_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16860..17417
DNA (558bp) protein (186aa)
DJ-1 family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9Z8_9CLOT
DJ-1 family protein {ECO:0000313|EMBL:EHJ01537.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
DJ-1 family protein
L3_098_220G1_scaffold_393_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17520..19286
DNA (1767bp) protein (589aa)
recJ2; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AGX44953.1}; EC=3.1.-.- {ECO:0000313|EMBL:AGX44953.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWQ6_CLOSA
Displaying 15 items

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