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L3_098_220G1_scaffold_404

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_404_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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470..895
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JP64_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84768.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_098_220G1_scaffold_404_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

882..1334
DNA (453bp) protein (151aa)
UPI0003D68D7E related cluster n=1 Tax=unknown RepID=UPI0003D68D7E
Uncharacterized protein {ECO:0000313|EMBL:ETI91826.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_098_220G1_scaffold_404_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1554..1994)
DNA (441bp) protein (147aa)
Chaperone family protein, Hsp20 family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QCR4_9CLOT
Chaperone family protein, Hsp20 family {ECO:0000313|EMBL:EKY25759.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
heat shock protein Hsp20
L3_098_220G1_scaffold_404_4
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2505..3008)
DNA (504bp) protein (168aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Ruminococcus albus 8 RepID=E9SAZ9_RUMAL
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:EGC03700.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
heptaprenyl diphosphate synthase component I
L3_098_220G1_scaffold_404_5
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3088..3387)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6P717_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC19320.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
hypothetical protein
L3_098_220G1_scaffold_404_6
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3458..4534)
DNA (1077bp) protein (359aa)
ApbE family protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YH93_9FIRM
ApbE family protein {ECO:0000313|EMBL:CDA24094.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
apbE; thiamin biosynthesis lipoprotein ApbE
L3_098_220G1_scaffold_404_7
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4521..5951)
DNA (1431bp) protein (477aa)
FMN-binding domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S249_9CLOT
FMN-binding domain protein {ECO:0000313|EMBL:CDC40712.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_098_220G1_scaffold_404_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6573..7130
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28450.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_220G1_scaffold_404_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7144..7833
DNA (690bp) protein (230aa)
Radical SAM domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFC9_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EKY26693.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
radical SAM protein
L3_098_220G1_scaffold_404_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8044..9492
DNA (1449bp) protein (483aa)
pepA; putative cytosol aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFH1_9CLOT
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_098_220G1_scaffold_404_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9687..11321
DNA (1635bp) protein (545aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
yycG; sensor histidine kinase YycG (EC:2.7.13.3)
UPI0003D60540 related cluster n=1 Tax=unknown RepID=UPI0003D60540
L3_098_220G1_scaffold_404_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11706..12842
DNA (1137bp) protein (379aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFC0_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EKY26683.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sporulation integral membrane protein YtvI
L3_098_220G1_scaffold_404_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13155..13985
DNA (831bp) protein (277aa)
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUU4_9CLOT
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ56420.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
response regulator
L3_098_220G1_scaffold_404_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14187..14687
DNA (501bp) protein (167aa)
PRC-barrel domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFA5_9CLOT
PRC-barrel domain protein {ECO:0000313|EMBL:EKY26679.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
PRC-barrel domain-containing protein
L3_098_220G1_scaffold_404_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14671..15711
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY26678.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
permease
L3_098_220G1_scaffold_404_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16161..18809
DNA (2649bp) protein (883aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QGG2_9CLOT
L3_098_220G1_scaffold_404_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18942..19199
DNA (258bp) protein (86aa)
UPF0297 protein HMPREF0216_01861 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFE5_9CLOT
UPF0297 protein HMPREF0216_01861 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_098_220G1_scaffold_404_18
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

19369..19455
DNA (87bp) protein (29aa)
Uncharacterized protein n=6 Tax=Firmicutes bacterium M10-2 RepID=R9LU15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS60359.1}; Flags: Fragment;; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
Predicted site-specific integrase-resolvase
Displaying 18 items

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