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L3_098_220G1_scaffold_406

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_406_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..574
DNA (573bp) protein (191aa)
Cation diffusion facilitator family transporter n=2 Tax=Bifidobacterium breve RepID=F6C8C5_BIFBA
Cobalt-zinc-cadmium resistance protein czcD
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEF26463.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_098_220G1_scaffold_406_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(677..1639)
DNA (963bp) protein (321aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L-lactate dehydrogenase n=8 Tax=Bifidobacterium RepID=F6C8C4_BIFBA
L-lactate dehydrogenase
L3_098_220G1_scaffold_406_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1824..3329)
DNA (1506bp) protein (502aa)
GTPase HflX n=2 Tax=Bifidobacterium breve RepID=F6C8C3_BIFBA
GTP-binding protein hflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_220G1_scaffold_406_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3453..4109
DNA (657bp) protein (219aa)
Methyltransferase small domain protein n=4 Tax=Bifidobacterium breve RepID=F6C8C2_BIFBA
16S RNA methylase
16S RNA methylase {ECO:0000313|EMBL:AHJ21446.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_098_220G1_scaffold_406_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4099..8235
DNA (4137bp) protein (1379aa)
ATP-dependent helicase n=1 Tax=Bifidobacterium breve RepID=UPI0002EEBFF1
hrpA; ATP-dependent helicase hrpA
ATP-dependent helicase {ECO:0000313|EMBL:BAR00376.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_098_220G1_scaffold_406_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8244..9449)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZLT7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75325.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Conserved hypothetical membrane spanning protein
L3_098_220G1_scaffold_406_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9660..10997)
DNA (1338bp) protein (446aa)
Glutamine synthetase, type I n=6 Tax=Bifidobacterium breve RepID=F6C8C0_BIFBA
Glutamine synthetase
Glutamine synthetase, type I {ECO:0000313|EMBL:EPD75324.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_220G1_scaffold_406_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11099..12535
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0I4_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75323.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_220G1_scaffold_406_9
unknown

Not on your lists

comp(12614..12706)
DNA (93bp) protein (31aa)

This feature has no annotations

L3_098_220G1_scaffold_406_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12703..13428)
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C8B8_BIFBA
bifunctional HisA/TrpF protein
L3_098_220G1_scaffold_406_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13452..14099)
DNA (648bp) protein (216aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Imidazole glycerol phosphate synthase subunit HisH n=5 Tax=Bifidobacterium breve RepID=F6C8B7_BIFBA
Imidazole glycerol phosphate synthase subunit hisH
L3_098_220G1_scaffold_406_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14130..14876)
DNA (747bp) protein (249aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C8B6_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE95958.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_098_220G1_scaffold_406_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14876..15475)
DNA (600bp) protein (200aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Imidazoleglycerol-phosphate dehydratase n=4 Tax=Bifidobacterium breve RepID=F6C8B5_BIFBA
Imidazoleglycerol-phosphate dehydratase
L3_098_220G1_scaffold_406_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15553..16713)
DNA (1161bp) protein (387aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Histidinol-phosphate aminotransferase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZF21_BIFBR
Histidinol-phosphate aminotransferase
L3_098_220G1_scaffold_406_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16710..18092)
DNA (1383bp) protein (461aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
histidinol dehydrogenase n=1 Tax=Bifidobacterium breve RepID=UPI0003717487
Histidinol dehydrogenase
L3_098_220G1_scaffold_406_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18195..18518)
DNA (324bp) protein (108aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Acylphosphatase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZG27_BIFBR
Acylphosphatase
L3_098_220G1_scaffold_406_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18633..19460
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZLS7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75315.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Aldo/keto reductase family
L3_098_220G1_scaffold_406_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19627..20178)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AG84_BIFBR
Hypothetical protein (Glycosyl hydrolases family 95)
Uncharacterized protein {ECO:0000313|EMBL:AHJ21459.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 18 items

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