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L3_098_220G1_scaffold_426

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_426_1
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..99)
DNA (99bp) protein (33aa)
30S ribosomal protein S2 n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCU1_9FIRM
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
L3_098_220G1_scaffold_426_2
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(365..1015)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D65803 related cluster n=1 Tax=unknown RepID=UPI0003D65803
ribulose-phosphate 3-epimerase
L3_098_220G1_scaffold_426_3
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1017..1880)
DNA (864bp) protein (288aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D5F9CD related cluster n=1 Tax=unknown RepID=UPI0003D5F9CD
ribosome small subunit-dependent GTPase A
L3_098_220G1_scaffold_426_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1888..3822)
DNA (1935bp) protein (645aa)
Kinase domain protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR18_9FIRM
Kinase domain protein {ECO:0000313|EMBL:EEP65361.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
serine/threonine protein kinase with PASTA sensor(s)
L3_098_220G1_scaffold_426_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3841..4542)
DNA (702bp) protein (234aa)
Protein phosphatase 2C n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR19_9FIRM
Protein phosphatase 2C {ECO:0000313|EMBL:EEP65362.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
protein serine/threonine phosphatase
L3_098_220G1_scaffold_426_6
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4535..5581)
DNA (1047bp) protein (349aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCT6_9FIRM
radical SAM enzyme, Cfr family
L3_098_220G1_scaffold_426_7
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5600..6955)
DNA (1356bp) protein (452aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D60805 related cluster n=1 Tax=unknown RepID=UPI0003D60805
sun protein
L3_098_220G1_scaffold_426_8
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6948..7634)
DNA (687bp) protein (229aa)
UPI0003D591F0 related cluster n=1 Tax=unknown RepID=UPI0003D591F0
Uncharacterized protein {ECO:0000313|EMBL:ETJ12186.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
hypothetical protein
L3_098_220G1_scaffold_426_9
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7714..8691)
DNA (978bp) protein (326aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
UPI0003D5A4C5 related cluster n=1 Tax=unknown RepID=UPI0003D5A4C5
methionyl-tRNA formyltransferase
L3_098_220G1_scaffold_426_10
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8717..9205)
DNA (489bp) protein (163aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
Peptide deformylase n=2 Tax=Veillonella dispar ATCC 17748 RepID=C4FR24_9FIRM
peptide deformylase
L3_098_220G1_scaffold_426_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9219..11402)
DNA (2184bp) protein (728aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Primosomal protein N n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR25_9FIRM
primosomal protein N'
L3_098_220G1_scaffold_426_12
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11463..12653)
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
S-adenosylmethionine synthase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR26_9FIRM
S-adenosylmethionine synthetase
L3_098_220G1_scaffold_426_13
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12956..14149)
DNA (1194bp) protein (398aa)
UPI0003D64823 related cluster n=1 Tax=unknown RepID=UPI0003D64823
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:ETJ19157.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
L3_098_220G1_scaffold_426_14
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14203..14418)
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LCS6_9FIRM
DNA-directed RNA polymerase subunit omega
L3_098_220G1_scaffold_426_15
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14423..15052)
DNA (630bp) protein (210aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
Guanylate kinase n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR30_9FIRM
guanylate kinase
L3_098_220G1_scaffold_426_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15061..15330)
DNA (270bp) protein (90aa)
UPF0296 protein VEIDISOL_01249 n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR31_9FIRM
UPF0296 protein VEIDISOL_01249 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
hypothetical protein
L3_098_220G1_scaffold_426_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15345..16226)
DNA (882bp) protein (294aa)
TIGR00255-like family protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FR32_9FIRM
TIGR00255-like family protein {ECO:0000313|EMBL:EEP65375.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
hypothetical protein
L3_098_220G1_scaffold_426_18
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16354..18069
DNA (1716bp) protein (572aa)
UPI0003D63540 related cluster n=1 Tax=unknown RepID=UPI0003D63540
Fibronectin-binding A protein {ECO:0000313|EMBL:ETJ14420.1}; Flags: Fragment;; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
fibronectin-binding A domain-containing protein
L3_098_220G1_scaffold_426_19
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18109..18558)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Veillonella RepID=C4FR34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ14033.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
hypothetical protein
Displaying 19 items

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