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L3_098_220G1_scaffold_452

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_452_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2..4438)
DNA (4437bp) protein (1479aa)
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:EEN79876.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EEN79876.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=S4ZYX0_LACRH
Hypothetical protein
L3_098_220G1_scaffold_452_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4819..5322
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=K8Q5U7_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS50186.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
hypothetical protein
L3_098_220G1_scaffold_452_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(5500..9162)
DNA (3663bp) protein (1221aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
DNA-directed RNA polymerase subunit beta' n=9 Tax=Lactobacillus rhamnosus RepID=B5QPQ6_LACRH
DNA-directed RNA polymerase beta' subunit
L3_098_220G1_scaffold_452_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(9175..12936)
DNA (3762bp) protein (1254aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
DNA-directed RNA polymerase subunit beta n=6 Tax=Lactobacillus RepID=C2JYG5_LACRH
rpoB; DNA-directed RNA polymerase subunit beta
L3_098_220G1_scaffold_452_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(13195..15702)
DNA (2508bp) protein (836aa)
ATP-dependent Clp protease ATP-binding subunit n=10 Tax=Lactobacillus rhamnosus RepID=C7TMA8_LACRL
ATP-dependent Clp protease, ATP-binding subunit ClpC/Negative regulator of genetic competence clcC/mecB {ECO:0000313|EMBL:AGP75192.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
AAA ATPase
L3_098_220G1_scaffold_452_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15742..16209)
DNA (468bp) protein (156aa)
Transcriptional repressor of class III stress genes n=11 Tax=Lactobacillus rhamnosus RepID=B5QPQ3_LACRH
ctsR; transcriptional regulator CtsR family
Transcriptional regulator, CtsR family {ECO:0000313|EMBL:CAR88395.1}; Transcriptional repressor {ECO:0000313|EMBL:BAI42935.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Displaying 6 items

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