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L3_098_220G1_scaffold_471

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_471_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

631..1044
DNA (414bp) protein (138aa)
Glycopeptide antibiotics resistance protein n=10 Tax=Lactobacillus rhamnosus RepID=C7TIG5_LACRL
Glycopeptide antibiotics resistance protein
Glycopeptide antibiotics resistance protein {ECO:0000313|EMBL:EKS51185.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_098_220G1_scaffold_471_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1325..2182
DNA (858bp) protein (286aa)
Glucose uptake protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TIG6_LACRL
sugar transport family protein
Glucose uptake protein {ECO:0000313|EMBL:AGP73828.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_098_220G1_scaffold_471_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2380..3720
DNA (1341bp) protein (447aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Glucose-6-phosphate isomerase; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Glucose-6-phosphate isomerase n=13 Tax=Lactobacillus RepID=C7TIG7_LACRL
Glucose-6-phosphate isomerase
L3_098_220G1_scaffold_471_4
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3847..5031)
DNA (1185bp) protein (395aa)
Integrase family protein n=8 Tax=root RepID=K0MUS8_LACCA
integrase family protein
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EPC13212.1}; TaxID=1256230 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. tolerans Lpl7.;"
L3_098_220G1_scaffold_471_5
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5126..5491)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F4Y2_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ64745.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_098_220G1_scaffold_471_6
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5547..6116)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei A2-362 RepID=K6RCZ7_LACCA
Uncharacterized protein {ECO:0000313|EMBL:GAN41546.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
hypothetical protein
L3_098_220G1_scaffold_471_7
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6132..6815)
DNA (684bp) protein (228aa)
SOS-response repressor/protease {ECO:0000313|EMBL:EKQ09054.1}; EC=3.4.21.88 {ECO:0000313|EMBL:EKQ09054.1};; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
SOS-response repressor/protease n=1 Tax=Lactobacillus casei A2-362 RepID=K6R7Z7_LACCA
XRE family transcriptional regulator
L3_098_220G1_scaffold_471_8
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6942..7196
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei A2-362 RepID=K6R096_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EKQ09053.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
transcriptional regulator, XRE family
L3_098_220G1_scaffold_471_9
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7241..7720)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F4Y8_LACPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ64751.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_098_220G1_scaffold_471_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7807..7971
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=K8QHF5_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS51198.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_098_220G1_scaffold_471_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7935..8078)
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=K8Q5C9_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS51199.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_098_220G1_scaffold_471_12
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8187..8345
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Lactobacillus paracasei subsp. paracasei RepID=S2R7T2_LACPA
Uncharacterized protein {ECO:0000313|EMBL:EPC74282.1}; TaxID=1256208 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp41.;"
hypothetical protein
L3_098_220G1_scaffold_471_13
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8411..8959
DNA (549bp) protein (183aa)
Uncharacterized protein n=7 Tax=Lactobacillus casei group RepID=K6QVJ7_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EPC50405.1}; TaxID=1256202 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei CNCM I-4270.;"
hypothetical protein
L3_098_220G1_scaffold_471_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8938..9168
DNA (231bp) protein (77aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=S4ZWS5_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS51203.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_098_220G1_scaffold_471_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9312..9530
DNA (219bp) protein (73aa)
Conserved protein n=1 Tax=Lactobacillus rhamnosus (strain Lc 705) RepID=C7THK2_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC97274.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_098_220G1_scaffold_471_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9532..9702
DNA (171bp) protein (57aa)
Conserved protein n=3 Tax=Lactobacillus rhamnosus RepID=C7THK3_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS51205.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_098_220G1_scaffold_471_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9714..10589
DNA (876bp) protein (292aa)
Prophage associated recombinational DNA repair protein RecT n=3 Tax=Lactobacillus rhamnosus RepID=S4ZUP6_LACRH
Prophage associated recombinational DNA repair protein RecT
Phage protein {ECO:0000313|EMBL:BAI41580.1}; RecT family protein {ECO:0000313|EMBL:CAR86999.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_098_220G1_scaffold_471_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10609..11373
DNA (765bp) protein (255aa)
Phage-related protein n=3 Tax=Lactobacillus rhamnosus RepID=C7THK5_LACRL
pi112; hypothetical protein
Phage protein {ECO:0000313|EMBL:BAI41581.1}; Phage-related protein {ECO:0000313|EMBL:CAR87000.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_098_220G1_scaffold_471_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11389..12345
DNA (957bp) protein (319aa)
DnaD domain protein n=2 Tax=Lactobacillus rhamnosus RepID=K8QHE5_LACRH
DnaD domain protein {ECO:0000313|EMBL:EKS51208.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
phage-related replication protein
L3_098_220G1_scaffold_471_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12358..12843
DNA (486bp) protein (162aa)
Single-stranded DNA-binding protein n=2 Tax=Lactobacillus rhamnosus RepID=K8Q5C1_LACRH
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Single-stranded DNA-binding protein
L3_098_220G1_scaffold_471_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13152..13367
DNA (216bp) protein (72aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=S4ZVD8_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS51211.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_098_220G1_scaffold_471_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13364..13555
DNA (192bp) protein (64aa)
Phage-related protein DNA-binding protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TBL1_LACRG
phage-related DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:KIC97280.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_098_220G1_scaffold_471_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13925..14374
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei UCD174 RepID=K6S8G6_LACCA
hypothetical protein
Phage protein {ECO:0000313|EMBL:KIC97281.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_098_220G1_scaffold_471_24
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14377..14760
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Lactobacillus casei 5b RepID=U6SB00_LACCA
Uncharacterized protein {ECO:0000313|EMBL:ERN48462.1}; TaxID=1378069 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei 5b.;"
Hypothetical protein
L3_098_220G1_scaffold_471_25
unknown

Not on your lists

14905..15222
DNA (318bp) protein (106aa)

This feature has no annotations

L3_098_220G1_scaffold_471_26
Lactobacillus phage Lrm1, Caudovirales, Viruses

Not on your lists

15206..15424
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus phage Lrm1 RepID=B4XYT5_9CAUD
Putative uncharacterized protein {ECO:0000313|EMBL:ABY84346.1}; TaxID=496874 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Lactobacillus phage Lrm1.;"
Hypothetical protein
L3_098_220G1_scaffold_471_27
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15414..15590
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=G6ARX5_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKQ03679.1}; TaxID=1051653 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei A2-362.;"
Hypothetical protein
L3_098_220G1_scaffold_471_28
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15580..15951
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp71 RepID=S2RIH4_LACPA
phage protein
Phage protein {ECO:0000313|EMBL:AGT63641.1}; TaxID=537973 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei 8700:2.;"
L3_098_220G1_scaffold_471_29
unknown

Not on your lists

16018..16191
DNA (174bp) protein (58aa)

This feature has no annotations

L3_098_220G1_scaffold_471_30
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16188..16556
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei Lpp219 RepID=S2PST0_LACPA
Uncharacterized protein {ECO:0000313|EMBL:GAN41565.1}; TaxID=1435040 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei NRIC 1981.;"
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy