ggKbase home page

L3_098_220G1_scaffold_555

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_555_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


110..736
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=5 Tax=Bifidobacterium breve RepID=F6C9S6_BIFBA
SSU ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_098_220G1_scaffold_555_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(812..1213)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZDH0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74768.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Glutamine amidotransferase, class I
L3_098_220G1_scaffold_555_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1161..1427)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZDH0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74768.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
peptidase C26
L3_098_220G1_scaffold_555_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1569..2054)
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=S3AEW1_BIFBR
Conserved hypothetical protein, possible deaminase
Cytidine deaminase {ECO:0000313|EMBL:BAQ99888.1}; Putative cytidine deaminase {ECO:0000313|EMBL:EFE89455.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_098_220G1_scaffold_555_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2144..2500
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=S2ZK78_BIFBR
Hypothetical membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74770.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_220G1_scaffold_555_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2605..3207
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZEG7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74771.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical protein, putative transglutaminase, possible cysteine protease
L3_098_220G1_scaffold_555_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3384..3740)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZXJ8_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74772.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_220G1_scaffold_555_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3727..4020)
DNA (294bp) protein (98aa)
RelB/DinJ family addiction module antitoxin n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZDH4_BIFBR
RelB/DinJ family addiction module antitoxin {ECO:0000313|EMBL:EPD74773.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
relB; Hypothetical protein
L3_098_220G1_scaffold_555_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4167..4340
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AEW5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74774.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
is30 family transposase
L3_098_220G1_scaffold_555_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4537..5214
DNA (678bp) protein (226aa)
Integrase, catalytic region n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNI1_BIFLS
Transposase
Transposase {ECO:0000313|EMBL:AHJ19127.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_098_220G1_scaffold_555_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5335..5655)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZEH1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74776.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_220G1_scaffold_555_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5674..6366)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZXK2_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74777.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_220G1_scaffold_555_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6611..8536)
DNA (1926bp) protein (642aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZDH9_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74778.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L3_098_220G1_scaffold_555_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8785..9762
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AEW8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74779.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
transcriptional regulator
L3_098_220G1_scaffold_555_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9742..10911)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZK85_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74780.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Permease
L3_098_220G1_scaffold_555_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10975..11919)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZEH6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74781.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Esterase/lipase
L3_098_220G1_scaffold_555_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12708..14069
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZXK7_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74782.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Cytosine deaminase and related metal-dependent hydrolases
L3_098_220G1_scaffold_555_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14166..14855
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZDI4_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74783.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Xanthine/uracil permeases
L3_098_220G1_scaffold_555_19
unknown

Not on your lists

14906..14971
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 19 items

View Taxonomy