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L3_098_220G1_scaffold_865

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_220G1_scaffold_865_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..666
DNA (666bp) protein (222aa)
membrane protein n=1 Tax=Bifidobacterium breve RepID=UPI00030071A5
Hypothetical membrane spanning protein with DUF20 domain
Hypothetical membrane spanning protein with DUF20 domain {ECO:0000313|EMBL:AHJ19870.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_098_220G1_scaffold_865_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

666..1889
DNA (1224bp) protein (408aa)
Glycosyltransferase, group 2 family protein n=4 Tax=Bifidobacterium breve RepID=F6C6R6_BIFBA
N-acetylglucosaminyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPD75837.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_220G1_scaffold_865_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2323..3396
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHD5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75836.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ABC transporter ATP-binding protein
L3_098_220G1_scaffold_865_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3396..5066
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L1S8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE88665.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
putative membrane spanning protein
L3_098_220G1_scaffold_865_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5091..6587
DNA (1497bp) protein (499aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AHK0_BIFBR
putative secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:EPD75834.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_220G1_scaffold_865_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6623..7774
DNA (1152bp) protein (384aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
tRNA(Ile)-lysidine synthase n=3 Tax=Bifidobacterium breve RepID=F6C6R2_BIFBA
tRNA(Ile)-lysidine synthetase TilS
L3_098_220G1_scaffold_865_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7761..8324
DNA (564bp) protein (188aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EFE88668.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EFE88668.1};; Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:BAR00574.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypoxanthine phosphoribosyltransferase n=3 Tax=Bifidobacterium breve RepID=F6C6R1_BIFBA
Hypoxanthine-guanine phosphoribosyltransferase
L3_098_220G1_scaffold_865_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8321..8995
DNA (675bp) protein (225aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATP-dependent zinc metalloprotease FtsH n=4 Tax=Bifidobacterium breve RepID=F6C6R0_BIFBA
Cell division protein ftsH
L3_098_220G1_scaffold_865_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8976..10301
DNA (1326bp) protein (442aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ATPase AAA n=1 Tax=Bifidobacterium breve RepID=UPI00030A0A76
Cell division protein ftsH
L3_098_220G1_scaffold_865_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10398..11057
DNA (660bp) protein (220aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
GTP cyclohydrolase 1 n=5 Tax=Bifidobacterium breve RepID=F6C6Q9_BIFBA
folE; GTP cyclohydrolase I
L3_098_220G1_scaffold_865_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11255..11791
DNA (537bp) protein (179aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
dihydropteroate synthase n=1 Tax=Bifidobacterium breve RepID=UPI0002D3D174
Dihydropteroate synthase
L3_098_220G1_scaffold_865_12
unknown

Not on your lists

comp(11710..11961)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_098_220G1_scaffold_865_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12060..13604
DNA (1545bp) protein (515aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:EFE88673.1}; EC=2.7.6.3 {ECO:0000313|EMBL:EFE88673.1};; Uncharacterized protein {ECO:0000313|EMBL:BAR00570.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=5 Tax=Bifidobacterium breve RepID=F6C6Q7_BIFBA
Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
L3_098_220G1_scaffold_865_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13743..14144
DNA (402bp) protein (134aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2T0_BIFBU
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE96163.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_098_220G1_scaffold_865_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14185..15090)
DNA (906bp) protein (302aa)
tesB; Acyl-CoA thioesterase (EC:3.1.2.-)
Acyl-CoA thioesterase {ECO:0000313|EMBL:ABE96162.1}; EC=3.1.2.- {ECO:0000313|EMBL:ABE96162.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Acyl-CoA thioesterase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2S9_BIFBU
L3_098_220G1_scaffold_865_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15307..16986)
DNA (1680bp) protein (560aa)
ATP-binding cassette protein, ChvD family n=5 Tax=Bifidobacterium breve RepID=F6C6Q4_BIFBA
ATP-binding protein of ABC transporter system
ATP-binding cassette protein, ChvD family {ECO:0000313|EMBL:ERI87295.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Displaying 16 items

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