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L3_098_332G1_scaffold_2025

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_2025_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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290..718
DNA (429bp) protein (143aa)
Pyridoxamine 5'-phosphate oxidase pdxH n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y147_BIFBU
Pyridoxamine 5'-phosphate oxidase pdxH
Pyridoxamine 5'-phosphate oxidase pdxH {ECO:0000313|EMBL:AHJ21302.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_098_332G1_scaffold_2025_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(636..1907)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C3J5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI85039.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Methyltransferase
L3_098_332G1_scaffold_2025_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1976..2821
DNA (846bp) protein (282aa)
Phosphoglycerate mutase family protein n=5 Tax=Bifidobacterium breve RepID=F9Y145_BIFBU
Phosphoglycerate mutase family protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75513.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_098_332G1_scaffold_2025_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3001..3951
DNA (951bp) protein (317aa)
CorA-like protein n=5 Tax=Bifidobacterium breve RepID=F6C956_BIFBA
Magnesium and cobalt transport protein corA
Magnesium and cobalt transport protein corA {ECO:0000313|EMBL:AHJ21299.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_098_332G1_scaffold_2025_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3964..4845
DNA (882bp) protein (294aa)
ABC transporter, substrate-binding protein, family 3 n=3 Tax=Bifidobacterium breve RepID=F6C957_BIFBA
ABC transporter substrate-binding protein
Putative solute binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ21298.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_098_332G1_scaffold_2025_6
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4857..7583
DNA (2727bp) protein (909aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BTC8_9BIFI
L3_098_332G1_scaffold_2025_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7669..8436
DNA (768bp) protein (256aa)
ComEA protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C959_BIFBA
Uncharacterized protein {ECO:0000313|EMBL:BAR00123.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
ComE operon protein 1
L3_098_332G1_scaffold_2025_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8433..10139
DNA (1707bp) protein (569aa)
competence protein n=1 Tax=Bifidobacterium breve RepID=UPI0002E1B673
ComE operon protein 3
ComE operon protein 3 {ECO:0000313|EMBL:ABE95806.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_098_332G1_scaffold_2025_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10218..11189
DNA (972bp) protein (324aa)
DNA polymerase III delta subunit {ECO:0000313|EMBL:BAR00121.1}; DNA polymerase III, delta subunit {ECO:0000313|EMBL:EFE89715.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFE89715.1};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
DNA polymerase III, delta subunit n=2 Tax=Bifidobacterium breve RepID=D4BPX8_BIFBR
DNA polymerase III, delta subunit
L3_098_332G1_scaffold_2025_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11198..11764
DNA (567bp) protein (189aa)
YjeE family ATPase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZMB7_BIFBR
putative atpase
Putative atpase {ECO:0000313|EMBL:AHJ21293.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_098_332G1_scaffold_2025_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11821..12702
DNA (882bp) protein (294aa)
Universal bacterial protein YeaZ n=2 Tax=Bifidobacterium breve RepID=D4BPX6_BIFBR
Glycoprotease protein family
Uncharacterized protein {ECO:0000313|EMBL:BAR00119.1}; Universal bacterial protein YeaZ {ECO:0000313|EMBL:EFE89713.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_098_332G1_scaffold_2025_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12717..13316
DNA (600bp) protein (200aa)
Ribosomal-protein-S18-alanine acetyltransferase n=2 Tax=Bifidobacterium breve RepID=F9Y0W1_BIFBU
Ribosomal-protein-S18-alanine acetyltransferase
Ribosomal-protein-S18-alanine acetyltransferase {ECO:0000313|EMBL:AHJ21291.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_098_332G1_scaffold_2025_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13313..13684
DNA (372bp) protein (124aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Putative metalloendopeptidase, glycoprotease family {ECO:0000313|EMBL:ACJ52115.1}; EC=3.4.24.57 {ECO:0000313|EMBL:ACJ52115.1};; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Bifidobacterium RepID=E4R2S2_BIFLM
Displaying 13 items

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