ggKbase home page

L3_098_332G1_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_41_1
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..4200)
DNA (4200bp) protein (1400aa)
Adhesion exoprotein (Fragment) n=1 Tax=Lactobacillus gasseri K7 RepID=S1RUL4_9LACO
adhesion exoprotein
Putative YSIRK type signal peptide {ECO:0000313|EMBL:KFL96635.1}; Flags: Fragment;; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
L3_098_332G1_scaffold_41_2
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4574..6205)
DNA (1632bp) protein (544aa)
60 kDa chaperonin n=1 Tax=Lactobacillus gasseri K7 RepID=S1SJ69_9LACO
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
groEL; molecular chaperone GroEL
L3_098_332G1_scaffold_41_3
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6237..6521)
DNA (285bp) protein (95aa)
10 kDa chaperonin n=12 Tax=Lactobacillus RepID=CH10_LACGA
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L3_098_332G1_scaffold_41_4
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7023..7781)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1RX38_9LACO
membrane protein
Membrane protein {ECO:0000313|EMBL:AJC08409.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_098_332G1_scaffold_41_5
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7778..8236)
DNA (459bp) protein (153aa)
LytTr DNA-binding domain protein n=3 Tax=Lactobacillus gasseri RepID=C4VTF5_9LACO
DNA-binding protein
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EFB62146.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L3_098_332G1_scaffold_41_6
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8401..8715)
DNA (315bp) protein (105aa)
PTS system, cellobiose-specific IIB component n=1 Tax=Lactobacillus johnsonii DPC 6026 RepID=F4AF58_LACJH
PTS system cellobiose-specific transporter subunit IIB
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:AEB92777.1}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L3_098_332G1_scaffold_41_7
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8716..10248)
DNA (1533bp) protein (511aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus johnsonii DPC 6026 RepID=F4AF57_LACJH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB92776.1}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L3_098_332G1_scaffold_41_8
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10258..11658)
DNA (1401bp) protein (467aa)
PTS system, cellobiose-specific IIC component n=1 Tax=Lactobacillus johnsonii DPC 6026 RepID=F4AF56_LACJH
PTS system cellobiose-specific transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L3_098_332G1_scaffold_41_9
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11774..12484)
DNA (711bp) protein (237aa)
Transcriptional regulator, GntR family n=1 Tax=Lactobacillus johnsonii DPC 6026 RepID=F4AF55_LACJH
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AEB92774.1}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L3_098_332G1_scaffold_41_10
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12562..13122)
DNA (561bp) protein (187aa)
Rossmann fold nucleotide-binding protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1RUL0_9LACO
lysine decarboxylase
Lysine decarboxylase {ECO:0000313|EMBL:AJC08411.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_098_332G1_scaffold_41_11
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13260..13904)
DNA (645bp) protein (215aa)
Redox-sensing transcriptional repressor Rex n=11 Tax=Lactobacillus RepID=REX_LACGA
redox-sensing transcriptional repressor Rex
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1408186 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii N6.2.;"
L3_098_332G1_scaffold_41_12
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14071..16002
DNA (1932bp) protein (644aa)
ABC transporter, ATP-binding protein n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VTF1_9LACO
ABC transporter
ABC transporter {ECO:0000313|EMBL:AJC08413.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_098_332G1_scaffold_41_13
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16061..17248)
DNA (1188bp) protein (396aa)
Predicted acyl-CoA transferase/carnitine dehydratase n=5 Tax=Lactobacillus gasseri RepID=Q045S2_LACGA
acyl-CoA transferase/carnitine dehydratase
CoA-transferase family III protein {ECO:0000313|EMBL:EFB62133.1}; TaxID=679196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 224-1.;"
L3_098_332G1_scaffold_41_14
unknown

Not on your lists

comp(17337..17453)
DNA (117bp) protein (39aa)

This feature has no annotations

L3_098_332G1_scaffold_41_15
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17450..17665)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus johnsonii pf01 RepID=F7SCP5_LACJH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC08417.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_098_332G1_scaffold_41_16
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17744..18193)
DNA (450bp) protein (150aa)
MutT-like domain containing protein n=1 Tax=Lactobacillus johnsonii pf01 RepID=F7SCP4_LACJH
MutT-like domain containing protein {ECO:0000313|EMBL:EGP13934.1}; TaxID=1037411 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii pf01.;"
NUDIX hydrolase
L3_098_332G1_scaffold_41_17
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18210..18527)
DNA (318bp) protein (106aa)
Uncharacterized protein (Fragment) n=1 Tax=Lactobacillus gasseri K7 RepID=S1RX23_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB92758.1}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L3_098_332G1_scaffold_41_18
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18518..18775)
DNA (258bp) protein (86aa)
Uncharacterized protein (Fragment) n=1 Tax=Lactobacillus gasseri K7 RepID=S1RX23_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB92758.1}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L3_098_332G1_scaffold_41_19
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18902..19027)
DNA (126bp) protein (42aa)
Truncated transposase n=2 Tax=Lactobacillus johnsonii RepID=F4AGK2_LACJH
truncated transposase
Truncated transposase {ECO:0000313|EMBL:AEB93034.1}; TaxID=909954 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii DPC 6026.;"
L3_098_332G1_scaffold_41_20
Lactobacillus johnsonii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19098..19571)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V517_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EGP13933.1}; TaxID=1037411 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus johnsonii pf01.;"
hypothetical protein
L3_098_332G1_scaffold_41_21
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19685..20980)
DNA (1296bp) protein (432aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Adenylosuccinate lyase n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VST0_9LACO
L3_098_332G1_scaffold_41_22
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20984..22273)
DNA (1290bp) protein (430aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
Adenylosuccinate synthetase n=7 Tax=Lactobacillus gasseri RepID=PURA_LACGA
L3_098_332G1_scaffold_41_23
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22464..23456
DNA (993bp) protein (331aa)
guanosine 5'-monophosphate oxidoreductase (EC:1.7.1.7)
GMP reductase {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00082324}; EC=1.7.1.7 {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00043008};; Guanosine 5'-monophosphate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01511}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
GMP reductase n=5 Tax=Lactobacillus gasseri RepID=GUAC_LACGA
L3_098_332G1_scaffold_41_24
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23611..24141
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VSS6_9LACO
sortase (surface protein transpeptidase)
Sortase (Surface protein transpeptidase) {ECO:0000313|EMBL:AJC08422.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_098_332G1_scaffold_41_25
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24128..24415
DNA (288bp) protein (96aa)
Uncharacterized protein n=3 Tax=Lactobacillus gasseri RepID=C4VSS5_9LACO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC08423.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_098_332G1_scaffold_41_26
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24690..25898
DNA (1209bp) protein (403aa)
Chloride transporter, ClC family n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V529_9LACO
chloride channel protein
Chloride channel protein {ECO:0000313|EMBL:AJC08424.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_098_332G1_scaffold_41_27
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25989..26612)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Lactobacillus gasseri K7 RepID=S1SNJ1_9LACO
membrane protein
Membrane protein {ECO:0000313|EMBL:AJC08425.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_098_332G1_scaffold_41_28
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(26847..27893)
DNA (1047bp) protein (349aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=575604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri SV-16A-US.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Lactobacillus gasseri JV-V03 RepID=D7V531_9LACO
tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
L3_098_332G1_scaffold_41_29
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27890..28465)
DNA (576bp) protein (192aa)
Acetyltransferase n=3 Tax=Lactobacillus gasseri RepID=J3ENC2_9LACO
alanine acetyltransferase
Alanine acetyltransferase {ECO:0000313|EMBL:AJC08427.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
L3_098_332G1_scaffold_41_30
Lactobacillus gasseri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(28431..29156)
DNA (726bp) protein (242aa)
Universal bacterial protein YeaZ n=1 Tax=Lactobacillus gasseri 202-4 RepID=C4VSS0_9LACO
glycoprotein endopeptidase
Glycoprotein endopeptidase {ECO:0000313|EMBL:AJC08428.1}; TaxID=1403312 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus gasseri 130918.;"
Displaying items 1-30 of 169 in total

View Taxonomy