name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_098_332G1_scaffold_88_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
3..104
|
ABC-type antimicrobial peptide transport system, ATPase component n=3 Tax=Bifidobacterium bifidum RepID=E4NYQ2_BIFBP
lolD; lipo protein-releasing system ATP-binding protein
ABC transporter ATP-binding component {ECO:0000313|EMBL:BAQ98675.1}; ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI83431.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
|
|
L3_098_332G1_scaffold_88_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
461..643
|
Branched-chain amino acid transport protein n=3 Tax=Bifidobacterium bifidum RepID=I3WJI3_BIFBI
alzD; branched-chain amino acid transport protein
Putative branched-chain amino acid permease {ECO:0000313|EMBL:KFI43795.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
|
|
L3_098_332G1_scaffold_88_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(713..1768)
|
Putative oxidoreductase n=2 Tax=Bifidobacterium bifidum RepID=I3WJI4_BIFBI
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AFL05047.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_098_332G1_scaffold_88_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(1995..2513)
|
PtpA Protein tyrosine phosphatase {ECO:0000313|EMBL:KFI43797.1}; EC=3.1.3.48 {ECO:0000313|EMBL:KFI43797.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ptpA; putative low molecular weight protein-tyrosine-phosphatase (EC:3.1.3.48)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DUF6_BIFBI
|
|
L3_098_332G1_scaffold_88_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(2583..3242)
|
Dihydrofolate reductase {ECO:0000313|EMBL:AFL05050.1}; EC=1.5.1.3 {ECO:0000313|EMBL:AFL05050.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Dihydrofolate reductase n=8 Tax=Bifidobacterium RepID=E3EQH1_BIFBS
dfrA; dihydrofolate reductase
|
|
L3_098_332G1_scaffold_88_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3290..4162)
|
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Thymidylate synthase n=3 Tax=Bifidobacterium RepID=I3WJI8_BIFBI
|
|
L3_098_332G1_scaffold_88_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
4616..5029
|
OsmC family protein n=4 Tax=Bifidobacterium RepID=E3EQH3_BIFBS
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:EKF16587.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
|
|
L3_098_332G1_scaffold_88_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(5173..6213)
|
Universal stress protein n=4 Tax=Bifidobacterium bifidum RepID=E3EQH4_BIFBS
universal stress protein family
Universal stress protein {ECO:0000313|EMBL:AFL05053.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_098_332G1_scaffold_88_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(6493..7299)
|
Cell wall-associated protein (NlpC/P60 family domain) n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCF3_9BIFI
NlpC/P60 domain
Uncharacterized protein {ECO:0000313|EMBL:ADO53631.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_098_332G1_scaffold_88_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(7450..8472)
|
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Bifidobacterium RepID=E4NYR1_BIFBP
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDB23127.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_098_332G1_scaffold_88_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8589..9779
|
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Phosphoserine aminotransferase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GPD7_9BIFI
serC; phosphoserine aminotransferase
|
|
L3_098_332G1_scaffold_88_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
9890..10144
|
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=I3WJJ5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53634.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_098_332G1_scaffold_88_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(10151..11419)
|
senX3; sensor-like histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Signal transduction histidine kinase n=3 Tax=Bifidobacterium RepID=E3ER60_BIFBS
|
|
L3_098_332G1_scaffold_88_14
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11603..12283
|
Phosphate-specific transport system accessory protein PhoU n=3 Tax=Bifidobacterium RepID=E3ER61_BIFBS
phosphate ABC transporter
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
|
|
L3_098_332G1_scaffold_88_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(12503..12772)
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HA92_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB23122.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
|
|
L3_098_332G1_scaffold_88_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(12816..13556)
|
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=7 Tax=Bifidobacterium bifidum RepID=E4NYR6_BIFBP
gpm5; phosphoglycerate mutase
|
|
L3_098_332G1_scaffold_88_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(13634..14599)
|
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=3 Tax=Bifidobacterium bifidum RepID=E4VBU5_BIFBI
menA; 1,4-dihydroxy-2-naphthoateoctaprenyl transferase
|
|
L3_098_332G1_scaffold_88_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(14814..16505)
|
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Lysine--tRNA ligase n=4 Tax=Bifidobacterium bifidum RepID=E3ER65_BIFBS
lysS; Lysyl-tRNA synthetase
|
|
L3_098_332G1_scaffold_88_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
16872..18059
|
Transporter, major facilitator family protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VBU3_BIFBI
araJ; arabinose polymer MFS transporter
Arabinose polymer MFS transporter {ECO:0000313|EMBL:EKE50158.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
|
|
L3_098_332G1_scaffold_88_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18237..20300
|
Tetratricopeptide tPR_2 repeat protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MUQ6_BIFBI
Tetratricopeptide tPR_2 repeat protein {ECO:0000313|EMBL:EKF15758.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
|
|
L3_098_332G1_scaffold_88_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20369..20980
|
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=I3WJK4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53643.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_098_332G1_scaffold_88_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(21034..22011)
|
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ER69_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53644.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
|
|
L3_098_332G1_scaffold_88_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(22044..23759)
|
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ER70_BIFBS
Uncharacterized protein {ECO:0000313|EMBL:ADO53645.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
PspC domain
|
|
L3_098_332G1_scaffold_88_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
23840..25318
|
Putative histidine kinase sensor of two component system n=2 Tax=Bifidobacterium bifidum RepID=I3WJK7_BIFBI
putative histidine kinase sensor of two component system
Putative histidine kinase sensor of two component system {ECO:0000313|EMBL:AFL05070.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
|
|
L3_098_332G1_scaffold_88_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
25315..26148
|
Response regulator of two-component system n=3 Tax=Bifidobacterium bifidum RepID=K2I5Y4_BIFBI
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ERI83477.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
response regulator of two-component system
|
|
L3_098_332G1_scaffold_88_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
26270..27718
|
gnt; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
6-phosphogluconate dehydrogenase, decarboxylating n=4 Tax=Bifidobacterium bifidum RepID=E4NYS6_BIFBP
|
|
L3_098_332G1_scaffold_88_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(27796..28398)
|
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CFZ7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83475.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
|
|
L3_098_332G1_scaffold_88_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28588..29376)
|
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase n=3 Tax=Bifidobacterium bifidum RepID=I3WJL0_BIFBI
6-phosphogluconolactonase {ECO:0000313|EMBL:EKE50166.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
|
|
L3_098_332G1_scaffold_88_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(29545..30534)
|
Oxppcycle protein OpcA n=5 Tax=Bifidobacterium bifidum RepID=E3ER76_BIFBS
opcA; oxppcycle protein OpcA
Outer membrane protein {ECO:0000313|EMBL:EKF16802.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
|
|
L3_098_332G1_scaffold_88_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(30531..32117)
|
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=3 Tax=Bifidobacterium bifidum RepID=E3ER77_BIFBS
|