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L3_098_332G1_scaffold_128

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_128_1
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

462..1613
DNA (1152bp) protein (384aa)
Exonuclease SbcD n=3 Tax=Dehalobacter RepID=K4KTT1_9FIRM
sbcD; Exonuclease SbcD
Exonuclease SbcD {ECO:0000313|EMBL:EQB21547.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
L3_098_332G1_scaffold_128_2
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1610..4720
DNA (3111bp) protein (1037aa)
Putative DNA-directed RNA polymerase, omega subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=D6MIB3_9CLOT
putative DNA-directed RNA polymerase, omega subunit
Putative DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:AKA68476.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L3_098_332G1_scaffold_128_3
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4864..11331
DNA (6468bp) protein (2156aa)
Glucan endo-1,3-beta-D-glucosidase {ECO:0000313|EMBL:EFM10085.1}; EC=3.2.1.39 {ECO:0000313|EMBL:EFM10085.1};; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK9.;"
Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IBK5_9BACL
glycoside hydrolase
L3_098_332G1_scaffold_128_4
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11905..12471
DNA (567bp) protein (189aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium sp. CAG:253 RepID=R6LW86_9CLOT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_098_332G1_scaffold_128_5
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12965..13636
DNA (672bp) protein (224aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Serine acetyltransferase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSM6_CLOPH
serine O-acetyltransferase
L3_098_332G1_scaffold_128_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13730..15127
DNA (1398bp) protein (466aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Cysteine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H7X7_9FIRM
cysteinyl-tRNA synthetase
L3_098_332G1_scaffold_128_7
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

15112..15585
DNA (474bp) protein (158aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Mini-ribonuclease 3 n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CHD5_9FIRM
ribonuclease III
L3_098_332G1_scaffold_128_8
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15678..16418
DNA (741bp) protein (247aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSM3_CLOPH
RNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ABX43675.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_332G1_scaffold_128_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16774..18087
DNA (1314bp) protein (438aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=N2B1L2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS03678.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_098_332G1_scaffold_128_10
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18204..19553
DNA (1350bp) protein (450aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIV4_CLOPH
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABX40953.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_332G1_scaffold_128_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19956..21641
DNA (1686bp) protein (562aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R956_CLOSW
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ADL04031.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_098_332G1_scaffold_128_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21786..23480
DNA (1695bp) protein (565aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R956_CLOSW
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ADL04031.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_098_332G1_scaffold_128_13
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23567..23722)
DNA (156bp) protein (52aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=B0MGG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC37894.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
chaperonin GroEL
L3_098_332G1_scaffold_128_14
unknown

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24164..24478
DNA (315bp) protein (105aa)

This feature has no annotations

L3_098_332G1_scaffold_128_15
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24706..25662
DNA (957bp) protein (319aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KLE8_CLOPH
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:ABX41277.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_332G1_scaffold_128_16
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26154..27014
DNA (861bp) protein (287aa)
Cell Wall Hydrolase n=1 Tax=Clostridium sp. CAG:411 RepID=R7HY23_9CLOT
Cell Wall Hydrolase {ECO:0000313|EMBL:CDE44176.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
cell wall hydrolase
L3_098_332G1_scaffold_128_17
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27344..29020
DNA (1677bp) protein (559aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
Glutaminyl-tRNA synthetase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSJ6_CLOPH
L3_098_332G1_scaffold_128_18
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29033..29881
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LZM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB89099.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
hypothetical protein
L3_098_332G1_scaffold_128_19
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29972..30721)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KSJ4_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43646.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_332G1_scaffold_128_20
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30830..31702
DNA (873bp) protein (291aa)
8-oxoguanine DNA-glycosylase (Ogg) n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z2F0_9FIRM
8-oxoguanine DNA-glycosylase (Ogg) {ECO:0000313|EMBL:CDA28136.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
N-glycosylase/DNA lyase
L3_098_332G1_scaffold_128_21
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31934..32221
DNA (288bp) protein (96aa)
10 kDa chaperonin n=1 Tax=Clostridium sp. CAG:411 RepID=R7I345_9CLOT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
chaperonin Cpn10
L3_098_332G1_scaffold_128_22
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32293..33918
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=1 Tax=Roseburia sp. CAG:380 RepID=R6VGM7_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
chaperonin GroL
L3_098_332G1_scaffold_128_23
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34178..34681
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XNU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL03854.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L3_098_332G1_scaffold_128_24
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35025..36479
DNA (1455bp) protein (485aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=4 Tax=Lachnospiraceae RepID=E9RVL2_9FIRM
L3_098_332G1_scaffold_128_25
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36859..37581
DNA (723bp) protein (241aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium sp. CAG:411 RepID=R7I6Z7_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDE46287.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L3_098_332G1_scaffold_128_26
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37700..38179)
DNA (480bp) protein (160aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Clostridium sp. CAG:411 RepID=R7I4A5_9CLOT
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:CDE46286.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
L3_098_332G1_scaffold_128_27
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38585..39508
DNA (924bp) protein (308aa)
Phosphate ABC transporter n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GDW6_EUBLK
phosphate ABC transporter
Phosphate ABC transporter {ECO:0000313|EMBL:ADO37348.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_098_332G1_scaffold_128_28
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39510..40388
DNA (879bp) protein (293aa)
Putative phosphate ABC transporter n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GE97_EUBLK
putative phosphate ABC transporter
Tax=BJP_IG2102_Clostridiales_34_350
L3_098_332G1_scaffold_128_29
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40673..41830
DNA (1158bp) protein (386aa)
Phosphate ABC transporter n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GE96_EUBLK
phosphate ABC transporter
Tax=BJP_IG2102_Clostridiales_34_350
L3_098_332G1_scaffold_128_30
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41871..42629
DNA (759bp) protein (253aa)
Phosphate import ATP-binding protein PstB n=2 Tax=Megamonas RepID=H3KA47_9FIRM
phosphate ABC transporter ATP-binding protein
Tax=BJP_IG2102_Clostridiales_34_350
Displaying items 1-30 of 69 in total

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