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L3_098_332G1_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_154_1
Enterococcus villorum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..140)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Enterococcus villorum ATCC 700913 RepID=R2S893_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH89041.1}; TaxID=1158604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus villorum ATCC 700913.;"
Type I restriction-modification system, specificity subunit S
L3_098_332G1_scaffold_154_2
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(146..1744)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97934.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
type I restriction-modification system methylation subunit
L3_098_332G1_scaffold_154_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1979..2503)
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBB1_9FIRM
L3_098_332G1_scaffold_154_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2591..3286)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77988.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
methyltransferase, YaeB/AF_0241 family
L3_098_332G1_scaffold_154_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3295..5535)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77989.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
cyclic nucleotide-binding protein
L3_098_332G1_scaffold_154_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5539..8292)
DNA (2754bp) protein (918aa)
beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase family 3 domain-containing protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ02_9FIRM
Glycoside hydrolase family 3 domain-containing protein {ECO:0000313|EMBL:CCZ77990.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_098_332G1_scaffold_154_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8379..8828)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77991.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_154_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8818..9480)
DNA (663bp) protein (221aa)
Stage V sporulation protein AA n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBB6_9FIRM
Stage V sporulation protein AA {ECO:0000313|EMBL:CCZ77992.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
stage V sporulation protein AA
L3_098_332G1_scaffold_154_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9680..10141)
DNA (462bp) protein (154aa)
SpoVA protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIA2_9FIRM
SpoVA protein {ECO:0000313|EMBL:CCZ77993.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
SpoVA protein.
L3_098_332G1_scaffold_154_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10224..10568)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77994.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_154_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10617..11276)
DNA (660bp) protein (220aa)
GTP pyrophosphokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ09_9FIRM
GTP pyrophosphokinase {ECO:0000313|EMBL:CCZ77995.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_154_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11430..11693)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77996.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_154_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11677..12495)
DNA (819bp) protein (273aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBD5_9FIRM
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CCZ77997.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNA methyltransferase, TrmH family, group 3
L3_098_332G1_scaffold_154_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12499..12933)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77998.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_154_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12930..13703)
DNA (774bp) protein (258aa)
Uncharacterized conserved protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQH6_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCZ77999.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_154_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13797..14768)
DNA (972bp) protein (324aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
6-phosphofructokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ35_9FIRM
6-phosphofructokinase
L3_098_332G1_scaffold_154_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14832..18356)
DNA (3525bp) protein (1175aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
DNA polymerase III catalytic subunit DnaE type n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3P5_9FIRM
L3_098_332G1_scaffold_154_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18453..19241)
DNA (789bp) protein (263aa)
Transcriptional regulator AraC family n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBE1_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ78002.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator, AraC family
L3_098_332G1_scaffold_154_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19419..20366)
DNA (948bp) protein (316aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Beta galactosidase small chain. (EC:3.2.1.23)
Beta galactosidase small chain n=1 Tax=Roseburia sp. CAG:18 RepID=R5UID5_9FIRM
L3_098_332G1_scaffold_154_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20350..22308)
DNA (1959bp) protein (653aa)
Beta-galactosidase large subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQI8_9FIRM
Beta-galactosidase large subunit {ECO:0000313|EMBL:CCZ78004.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
beta-galactosidase, large subunit
L3_098_332G1_scaffold_154_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22310..23671)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78005.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_098_332G1_scaffold_154_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24031..24885
DNA (855bp) protein (285aa)
Transcriptional regulator AraC family n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3P9_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ78006.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
AraC-type DNA-binding domain-containing proteins
L3_098_332G1_scaffold_154_23
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25344..26195
DNA (852bp) protein (284aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Roseburia sp. CAG:182 RepID=R7QZW3_9FIRM
Predicted esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:CDF43203.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_098_332G1_scaffold_154_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26348..28816)
DNA (2469bp) protein (823aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBE4_9FIRM
L3_098_332G1_scaffold_154_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28851..32018)
DNA (3168bp) protein (1056aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Isoleucine--tRNA ligase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZGL8_EUBR3
ileS; isoleucyl-tRNA synthetase
L3_098_332G1_scaffold_154_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32345..33277)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78011.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_098_332G1_scaffold_154_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33290..34156)
DNA (867bp) protein (289aa)
Predicted membrane protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBE9_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCZ78012.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted membrane protein
L3_098_332G1_scaffold_154_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34534..36018)
DNA (1485bp) protein (495aa)
L-fucose isomerase and related proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIE4_9FIRM
L-fucose isomerase and related proteins {ECO:0000313|EMBL:CCZ78013.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L-fucose isomerase and related proteins
L3_098_332G1_scaffold_154_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36080..37552)
DNA (1473bp) protein (491aa)
xylulokinase (EC:2.7.1.17)
Xylulokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQJ5_9FIRM
Xylulokinase {ECO:0000313|EMBL:CCZ78014.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_098_332G1_scaffold_154_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37829..38842
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78015.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators
Displaying items 1-30 of 61 in total

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