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L3_098_332G1_scaffold_186

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_186_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..391
DNA (390bp) protein (130aa)
Virulence protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKB2_9FIRM
Virulence protein
Virulence protein {ECO:0000313|EMBL:CBK94059.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_332G1_scaffold_186_2

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572..823
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SI08_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC57213.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_098_332G1_scaffold_186_3
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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820..1287
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MV79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74980.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
putative transcriptional regulatorTn916-like,CTn6-Orf11
L3_098_332G1_scaffold_186_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1349..2119
DNA (771bp) protein (257aa)
Predicted amidohydrolase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JN99_9FIRM
Predicted amidohydrolase
Predicted amidohydrolase {ECO:0000313|EMBL:CBK92453.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_098_332G1_scaffold_186_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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2210..2593
DNA (384bp) protein (128aa)
Lactoylglutathione lyase and related lyases (EC:4.4.1.5)
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:CBL41201.1}; EC=4.4.1.5 {ECO:0000313|EMBL:CBL41201.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Lactoylglutathione lyase and related lyases n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTQ9_9FIRM
L3_098_332G1_scaffold_186_6
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2741..2890
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UI83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68492.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_098_332G1_scaffold_186_7
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2940..4298)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YCC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA24510.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L3_098_332G1_scaffold_186_8
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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comp(4417..4680)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030B953F
Uncharacterized protein {ECO:0000313|EMBL:CDD70028.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L3_098_332G1_scaffold_186_9
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4750..4917)
DNA (168bp) protein (56aa)
Transposase IS66 n=1 Tax=Roseburia sp. CAG:182 RepID=R7QVU0_9FIRM
Transposase IS66 {ECO:0000313|EMBL:CDF41798.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
transposase
L3_098_332G1_scaffold_186_10

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comp(4936..5382)
DNA (447bp) protein (149aa)
Transposase, IS66 n=1 Tax=gut metagenome RepID=J9GZY3_9ZZZZ
Transposase, IS66 {ECO:0000313|EMBL:EJX06530.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_098_332G1_scaffold_186_11
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5406..5894)
DNA (489bp) protein (163aa)
Transposase IS66 n=1 Tax=Roseburia sp. CAG:182 RepID=R7QTE3_9FIRM
Transposase IS66 {ECO:0000313|EMBL:CDF41797.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
transposase
L3_098_332G1_scaffold_186_12
unknown

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comp(6109..6579)
DNA (471bp) protein (157aa)

This feature has no annotations

L3_098_332G1_scaffold_186_13
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7099..7260
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZU88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ17698.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L3_098_332G1_scaffold_186_14
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7345..8385
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N2A1M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ23227.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
transposase IS111A/IS1328/IS1533
L3_098_332G1_scaffold_186_15
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8459..9382)
DNA (924bp) protein (308aa)
BsuBI/PstI restriction endonuclease domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESX8_9FIRM
BsuBI/PstI restriction endonuclease domain protein {ECO:0000313|EMBL:EEG37720.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
type II site-specific deoxyribonuclease
L3_098_332G1_scaffold_186_16
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9375..10862)
DNA (1488bp) protein (496aa)
Eco57I restriction endonuclease n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESX7_9FIRM
Eco57I restriction endonuclease {ECO:0000313|EMBL:EEG37719.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
adenine-specific DNA-methyltransferase
L3_098_332G1_scaffold_186_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11372..11899
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZ32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92152.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
transposase IS4 family protein
L3_098_332G1_scaffold_186_18
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11903..12652
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I0Y5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE45146.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
transposase IS4 family protein
L3_098_332G1_scaffold_186_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12836..13405)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CG74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD26408.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_098_332G1_scaffold_186_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13559..13924
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UR15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78204.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GntR family transcriptional regulator
L3_098_332G1_scaffold_186_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13930..15294
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78205.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_186_22
unknown

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comp(15538..15957)
DNA (420bp) protein (140aa)

This feature has no annotations

L3_098_332G1_scaffold_186_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16076..16735)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79675.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_186_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17243..17398)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79502.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_186_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17729..19063
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79500.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
trk system potassium uptake protein TrkH
L3_098_332G1_scaffold_186_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19082..19729
DNA (648bp) protein (216aa)
K+ transport systems NAD-binding component n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7X1_9FIRM
K+ transport systems NAD-binding component {ECO:0000313|EMBL:CCZ79501.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
K+ transport systems, NAD-binding component
L3_098_332G1_scaffold_186_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19733..20344)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VFN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79502.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_098_332G1_scaffold_186_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20566..22137
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79503.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_098_332G1_scaffold_186_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22172..23116)
DNA (945bp) protein (315aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
6-phosphofructokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUZ2_9FIRM
6-phosphofructokinase {ECO:0000313|EMBL:CCZ79504.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_098_332G1_scaffold_186_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23139..24605)
DNA (1467bp) protein (489aa)
Beta-fructosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UN78_9FIRM
Beta-fructosidase {ECO:0000313|EMBL:CCZ79505.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
sucrose-6-phosphate hydrolase
Displaying items 1-30 of 69 in total

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