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L3_098_332G1_scaffold_187

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_187_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(259..2043)
DNA (1785bp) protein (595aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:EEP56346.1}; EC=3.6.3.- {ECO:0000313|EMBL:EEP56346.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Lipid A export ATP-binding/permease protein MsbA n=2 Tax=Clostridium butyricum RepID=B1R1I3_CLOBU
ABC transporter
L3_098_332G1_scaffold_187_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2044..3798)
DNA (1755bp) protein (585aa)
UPI0003D625C5 related cluster n=1 Tax=unknown RepID=UPI0003D625C5
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:ETI87642.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ABC transporter
L3_098_332G1_scaffold_187_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3931..4785
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1I5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84204.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AraC family transcriptional regulator
L3_098_332G1_scaffold_187_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4840..6054)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE12_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83378.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
SEC-C motif domain protein
L3_098_332G1_scaffold_187_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6211..7053)
DNA (843bp) protein (281aa)
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TKU2_9CLOT
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:EKQ52270.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
putative esterase of the alpha-beta hydrolase superfamily
L3_098_332G1_scaffold_187_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7373..8224)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z932_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36255.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC-type phosphate/phosphonate transport system, permease component
L3_098_332G1_scaffold_187_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8221..9006)
DNA (786bp) protein (262aa)
Phosphonate ABC transporter, permease PhnE n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU38_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96686.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
phnE; phosphonate ABC transporter, permease PhnE
L3_098_332G1_scaffold_187_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9017..9781)
DNA (765bp) protein (255aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
phnC; phosphonates import ATP-binding protein PhnC 2 (EC:3.6.3.28)
Phosphonate ABC transporter, ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIT6_CLOBU
L3_098_332G1_scaffold_187_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9881..10948)
DNA (1068bp) protein (356aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AW51_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96684.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein
L3_098_332G1_scaffold_187_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11186..11998)
DNA (813bp) protein (271aa)
Putative metal-dependent phosphoesterase, PHP family n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K585_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:KJZ93672.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative metal-dependent phosphoesterase, PHP family
L3_098_332G1_scaffold_187_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12143..12835)
DNA (693bp) protein (231aa)
Phosphonate ABC transporter ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z928_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93673.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC-type phosphonate transport system, ATPase component
L3_098_332G1_scaffold_187_12
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12853..13461)
DNA (609bp) protein (203aa)
Phosphonate metabolim protein, transferase hexapeptide repeat family n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KCQ6_CLOPA
phosphonate metabolim protein, transferase hexapeptide repeat family
Phosphonate metabolim protein, transferase hexapeptide repeat family {ECO:0000313|EMBL:AGK98324.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_098_332G1_scaffold_187_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13477..14649)
DNA (1173bp) protein (391aa)
Phosphonate metabolism protein PhnM n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU35_CLOBU
Metal-dependent hydrolase involved in phosphonate metabolism {ECO:0000313|EMBL:KJZ83513.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phosphonate metabolism protein PhnM
L3_098_332G1_scaffold_187_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14724..15566)
DNA (843bp) protein (281aa)
Phosphonate C-P lyase system protein PhnK n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIT2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97064.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC-type phosphonate transport system, ATPase component
L3_098_332G1_scaffold_187_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15580..16425)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AW48_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97063.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative enzyme of phosphonate metabolism
L3_098_332G1_scaffold_187_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16406..17530)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8T1_CLOBU
PhnI protein {ECO:0000313|EMBL:KJZ83515.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phosphonate metabolism protein
L3_098_332G1_scaffold_187_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17534..18139)
DNA (606bp) protein (202aa)
Phosphonate C-P lyase system protein PhnH n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z926_CLOBU
PhnH protein {ECO:0000313|EMBL:KJZ83534.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phosphonate C-P lyase system protein PhnH
L3_098_332G1_scaffold_187_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18170..18688)
DNA (519bp) protein (173aa)
Phosphonate C-P lyase system protein PhnG n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU31_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97069.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
phosphonate C-P lyase system protein PhnG
L3_098_332G1_scaffold_187_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18821..19261)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R2D8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD14410.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L3_098_332G1_scaffold_187_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19399..19911)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XWH8_9CLOT
shikimate kinase family protein
Shikimate kinase family protein {ECO:0000313|EMBL:AIY84729.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_098_332G1_scaffold_187_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20056..20736)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIS9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97066.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
GntR family transcriptional regulator
L3_098_332G1_scaffold_187_22
unknown

Not on your lists

comp(20799..20957)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_098_332G1_scaffold_187_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21445..24108
DNA (2664bp) protein (888aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
UPI00039E92C0 related cluster n=1 Tax=unknown RepID=UPI00039E92C0
ATPase {ECO:0000313|EMBL:KHD17070.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_098_332G1_scaffold_187_24
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24326..25372
DNA (1047bp) protein (349aa)
3-methylornithine synthase PylB {ECO:0000313|EMBL:AJG96993.1}; EC=5.4.99.- {ECO:0000313|EMBL:AJG96993.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Biotin synthase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRU5_CLOPA
biotin synthase
L3_098_332G1_scaffold_187_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25692..26423)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JF51_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD14298.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L3_098_332G1_scaffold_187_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26731..27642
DNA (912bp) protein (304aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXK8_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:EHI97313.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
polysaccharide deacetylase
L3_098_332G1_scaffold_187_27
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27685..28701)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQ56_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR32486.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_098_332G1_scaffold_187_28
unknown

Not on your lists

comp(28790..28945)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_098_332G1_scaffold_187_29
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29046..29513
DNA (468bp) protein (156aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MCL1_9CLOT
L3_098_332G1_scaffold_187_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29567..30241)
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=N9YSF8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94222.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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