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L3_098_332G1_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_222_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52..570
DNA (519bp) protein (173aa)
Site-specific recombinase, phage integrase family n=2 Tax=Bifidobacterium dentium RepID=E0Q9C4_9BIFI
phage integrase
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFM40847.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_098_332G1_scaffold_222_2
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(587..1150)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4IJG5_BIFAP
Twitching motility protein PilT {ECO:0000313|EMBL:KFJ05071.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
hypothetical protein
L3_098_332G1_scaffold_222_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1143..2312)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4INV0_BIFAP
Uncharacterized protein {ECO:0000313|EMBL:KEY26972.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
hypothetical protein
L3_098_332G1_scaffold_222_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2728..3666)
DNA (939bp) protein (313aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Protease HtpX homolog n=2 Tax=Bifidobacterium bifidum RepID=E4NYG5_BIFBP
htpX; endopeptidase HtpX
L3_098_332G1_scaffold_222_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3838..5289)
DNA (1452bp) protein (484aa)
dare; NADPH:adrenodoxin oxidoreductase (EC:1.18.1.2)
NADPH:adrenodoxin oxidoreductase n=2 Tax=Bifidobacterium bifidum RepID=K2MXK6_BIFBI
Ferredoxin/ferredoxin-NADP reductase {ECO:0000313|EMBL:BAQ97343.1}; Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERI82454.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_098_332G1_scaffold_222_6
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5432..7624)
DNA (2193bp) protein (731aa)
heavy metal translocating P-type ATPase (EC:3.6.3.5)
Cation transport ATPase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HAB9_9BIFI
Cation transport ATPase {ECO:0000313|EMBL:CDB23157.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_098_332G1_scaffold_222_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8002..9924)
DNA (1923bp) protein (641aa)
DegP trypsin-like serine protease {ECO:0000313|EMBL:KFI42242.1}; EC=3.4.21.107 {ECO:0000313|EMBL:KFI42242.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Trypsin n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DLN3_BIFBI
degP; Trypsin-like serine protease
L3_098_332G1_scaffold_222_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10293..11594
DNA (1302bp) protein (434aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; Queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Queuine tRNA-ribosyltransferase n=4 Tax=Bifidobacterium bifidum RepID=E4NYG1_BIFBP
L3_098_332G1_scaffold_222_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12228..12704)
DNA (477bp) protein (159aa)
Acetyltransferase family protein n=2 Tax=Bifidobacterium bifidum RepID=E4NYG0_BIFBP
acetyltransferase family protein
Acetyltransferase family protein {ECO:0000313|EMBL:KFI42235.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_098_332G1_scaffold_222_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12722..13540)
DNA (819bp) protein (273aa)
hydrolase (EC:4.2.99.20)
Hydrolase, alpha/beta fold family n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYF9_BIFBP
Hydrolase {ECO:0000313|EMBL:EKF14911.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_098_332G1_scaffold_222_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13662..13994)
DNA (333bp) protein (111aa)
UPF0145 protein BBIF_0154 n=5 Tax=Bifidobacterium RepID=E3ELG4_BIFBS
hypothetical protein
UPF0145 protein BBNG_00041 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_098_332G1_scaffold_222_12
unknown

Not on your lists

comp(13991..14194)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_098_332G1_scaffold_222_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14346..14744
DNA (399bp) protein (133aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=K2M148_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF14910.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_098_332G1_scaffold_222_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14961..15410
DNA (450bp) protein (150aa)
NTP pyrophosphohydrolase with NUDIX domain n=2 Tax=Bifidobacterium bifidum RepID=E3ELG2_BIFBS
MutT/nudix family protein
NTP pyrophosphohydrolase with NUDIX domain {ECO:0000313|EMBL:ADO52357.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_098_332G1_scaffold_222_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15407..18592
DNA (3186bp) protein (1062aa)
DNA/RNA helicase (DEAD/DEAH box family) n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELG1_BIFBS
DNA/RNA helicase
DNA/RNA helicase (DEAD/DEAH box family) {ECO:0000313|EMBL:ADO52356.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_098_332G1_scaffold_222_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18942..19442
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NYF4_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF14907.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_098_332G1_scaffold_222_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19447..20451)
DNA (1005bp) protein (335aa)
msrAB; peptide methionine sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase n=4 Tax=Bifidobacterium RepID=I3WFN4_BIFBI
Bifunctional methionine sulfoxide reductase {ECO:0000313|EMBL:BAQ97318.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_098_332G1_scaffold_222_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20553..20933)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAQ0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:BAQ97317.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_098_332G1_scaffold_222_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21132..21887)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HX38_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE51022.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L3_098_332G1_scaffold_222_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22151..23125)
DNA (975bp) protein (325aa)
membrane protein n=1 Tax=Bifidobacterium bifidum RepID=UPI00019763E1
Putative permease EamA-like transporter family {ECO:0000313|EMBL:CDB23032.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
permease
L3_098_332G1_scaffold_222_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23161..24210)
DNA (1050bp) protein (350aa)
PldB Lysophospholipase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I7Y6_BIFBI
PldB Lysophospholipase {ECO:0000313|EMBL:EKE51024.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
pldB Lysophospholipase
L3_098_332G1_scaffold_222_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24369..26696)
DNA (2328bp) protein (776aa)
Phage infection protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFM9_BIFBI
pip; phage infection protein
Phage infection protein {ECO:0000313|EMBL:AFL03692.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_098_332G1_scaffold_222_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26693..29515)
DNA (2823bp) protein (941aa)
Phage infection protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFM8_BIFBI
pip; phage infection protein
Phage infection protein {ECO:0000313|EMBL:AFL03691.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_098_332G1_scaffold_222_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29743..32274)
DNA (2532bp) protein (844aa)
pepX; Xaa-Pro dipeptidase (EC:3.4.14.5)
PepX Xaa-Pro dipeptidyl-peptidase n=5 Tax=Bifidobacterium RepID=E4NY70_BIFBP
PepX Xaa-Pro dipeptidyl-peptidase {ECO:0000313|EMBL:CDB23517.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_098_332G1_scaffold_222_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32515..33216
DNA (702bp) protein (234aa)
FHA domain containing protein n=8 Tax=Bifidobacterium RepID=E3ELF1_BIFBS
hypothetical protein
FHA domain-containing protein {ECO:0000313|EMBL:EKF14860.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_098_332G1_scaffold_222_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33244..33786
DNA (543bp) protein (181aa)
FHA domain protein n=7 Tax=Bifidobacterium RepID=E4VAP2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE51029.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_098_332G1_scaffold_222_27
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33793..35451
DNA (1659bp) protein (553aa)
pp2c; protein phosphatase 2C (EC:3.1.3.16)
Pp2c Protein phosphatase 2C n=2 Tax=Bifidobacterium RepID=E4NY67_BIFBP
Pp2c Protein phosphatase 2C {ECO:0000313|EMBL:CDB23528.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_098_332G1_scaffold_222_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35448..36926
DNA (1479bp) protein (493aa)
Protein involved in cell wall formation and stabilization of the FtsZ ring during cell division n=8 Tax=Bifidobacterium RepID=E3EPL6_BIFBS
ftsW; putative cell division protein
FtsW Cell division protein {ECO:0000313|EMBL:KFI42218.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_098_332G1_scaffold_222_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36923..38389
DNA (1467bp) protein (489aa)
Penicillin binding transpeptidase n=2 Tax=Bifidobacterium bifidum RepID=E3EPL5_BIFBS
mrdA; penicillin-binding protein
Penicillin binding transpeptidase {ECO:0000313|EMBL:ADO52342.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_098_332G1_scaffold_222_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38386..39369
DNA (984bp) protein (328aa)
PknA Serine/threonine protein kinase {ECO:0000313|EMBL:KFI42216.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI42216.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Serine/threonine protein kinase n=6 Tax=Bifidobacterium RepID=E3EPL4_BIFBS
Serine/threonine protein kinase
Displaying items 1-30 of 45 in total

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