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L3_098_332G1_scaffold_244

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_244_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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226..1692
DNA (1467bp) protein (489aa)
Uncharacterized oxidoreductase yeiQ n=33 Tax=Escherichia coli RepID=E2QP38_ECOLX
putative sugar dehydrogenase, NAD-dependent
Putative sugar dehydrogenase, NAD-dependent {ECO:0000313|EMBL:CAR08803.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_098_332G1_scaffold_244_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1810..2796
DNA (987bp) protein (329aa)
Predicted enzyme n=111 Tax=Escherichia coli RepID=B7UFJ0_ECO27
hypothetical protein
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ELJ70971.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_098_332G1_scaffold_244_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2835..3548
DNA (714bp) protein (238aa)
Inner membrane protein yeiU n=226 Tax=Escherichia coli RepID=E2QP40_ECOLX
yeiU; hypothetical protein
Inner membrane protein yeiU {ECO:0000313|EMBL:EZJ39496.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_098_332G1_scaffold_244_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3960..4526
DNA (567bp) protein (189aa)
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase n=1132 Tax=Enterobacteriaceae RepID=MEPS_ECO57
lipoprotein NlpC
Lipoprotein spr {ECO:0000313|EMBL:EGI11821.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L3_098_332G1_scaffold_244_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4707..6263
DNA (1557bp) protein (519aa)
Uncharacterized protein n=42 Tax=Escherichia coli RepID=B7NMZ1_ECO7I
Protein Rtn {ECO:0000313|EMBL:EOU94013.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
rtn; hypothetical protein
L3_098_332G1_scaffold_244_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6345..8159
DNA (1815bp) protein (605aa)
Uncharacterized protein n=47 Tax=Escherichia coli RepID=E0R1N7_ECOLX
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:ESD35813.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
hypothetical protein
L3_098_332G1_scaffold_244_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8160..9254
DNA (1095bp) protein (365aa)
Inner membrane ABC transporter permease protein YejB n=834 Tax=Enterobacteriaceae RepID=YEJB_ECO57
yejB; microcin C transporter YejABEF, permease subunit, ABC family
Inner membrane ABC transporter permease protein yejB {ECO:0000313|EMBL:KEN89792.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_098_332G1_scaffold_244_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9254..10279
DNA (1026bp) protein (342aa)
ABC transporter, permease protein n=705 Tax=Enterobacteriaceae RepID=A8A242_ECOHS
inner membrane ABC transporter permease YejE
ABC transporter, permease protein {ECO:0000313|EMBL:ESA91838.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L3_098_332G1_scaffold_244_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10281..11870
DNA (1590bp) protein (530aa)
Uncharacterized ABC transporter ATP-binding protein yejF n=32 Tax=Escherichia coli RepID=E2QP46_ECOLX
yejF; ABC transporter ATP-binding protein yejF
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQP50486.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_098_332G1_scaffold_244_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11874..12218)
DNA (345bp) protein (115aa)
Uncharacterized protein YejG n=1090 Tax=Enterobacteriaceae RepID=YEJG_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHP64061.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_098_332G1_scaffold_244_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12552..13742)
DNA (1191bp) protein (397aa)
Bicyclomycin/multidrug efflux system n=184 Tax=Escherichia RepID=B7MF97_ECO45
bcr; bicyclomycin/multidrug efflux system protein
Bicyclomycin resistance protein {ECO:0000313|EMBL:CKI27287.1}; Bicyclomycin/multidrug efflux system {ECO:0000313|EMBL:AJO84199.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_098_332G1_scaffold_244_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13770..14465)
DNA (696bp) protein (232aa)
rsuA; 16s rRNA pseudouridylate synthase A (EC:4.2.1.70)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
Pseudouridine synthase n=23 Tax=Escherichia coli RepID=E0R1N1_ECOLX
L3_098_332G1_scaffold_244_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14615..16375
DNA (1761bp) protein (587aa)
Predicted ATP-dependent helicase n=216 Tax=Escherichia coli RepID=C6V2S2_ECO5T
ATP-dependent helicase {ECO:0000313|EMBL:EQP50490.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
yejH; ATP-dependent helicase
L3_098_332G1_scaffold_244_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16500..16784
DNA (285bp) protein (95aa)
50S ribosomal protein L25 n=540 Tax=Escherichia RepID=RL25_ECO27
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01336, ECO:0000256|SAAS:SAAS00147491}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
L3_098_332G1_scaffold_244_15
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16923..17930)
DNA (1008bp) protein (336aa)
Nucleoid-associated protein YejK n=1077 Tax=Enterobacteriaceae RepID=NDPA_ECO24
37kDa nucleoid-associated protein
Nucleoid-associated protein YejK {ECO:0000256|HAMAP-Rule:MF_00730}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
L3_098_332G1_scaffold_244_16
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18112..18339
DNA (228bp) protein (76aa)
UPF0352 protein YejL n=1208 Tax=Enterobacteriaceae RepID=YEJL_ECO55
hypothetical protein
UPF0352 protein YejL {ECO:0000256|HAMAP-Rule:MF_00816}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L3_098_332G1_scaffold_244_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18359..20119
DNA (1761bp) protein (587aa)
Inner membrane protein YejM n=841 Tax=Escherichia RepID=YEJM_ECO57
Inner membrane protein yejM {ECO:0000313|EMBL:KDY68400.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
yejM; putative hydrolase, inner membrane
L3_098_332G1_scaffold_244_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20291..20539)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=T6C6K3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESD35825.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
autotransporter outer membrane protein
L3_098_332G1_scaffold_244_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20542..20931)
DNA (390bp) protein (130aa)
Uncharacterized protein n=58 Tax=Escherichia coli RepID=E4PD81_ECO8N
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP50513.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_098_332G1_scaffold_244_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21040..21243)
DNA (204bp) protein (68aa)
Uncharacterized protein n=139 Tax=Escherichia RepID=D2NKD8_ECOS5
yejO; outer membrane protein YejO
Putative outer membrane autotransporter {ECO:0000313|EMBL:EZJ39532.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_098_332G1_scaffold_244_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21563..22210
DNA (648bp) protein (216aa)
Nitrate/nitrite response regulator protein narP n=375 Tax=Escherichia RepID=E2QP59_ECOLX
narP; transcriptional regulator NarP
Response regulator {ECO:0000313|EMBL:EHU54845.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L3_098_332G1_scaffold_244_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22245..23297)
DNA (1053bp) protein (351aa)
Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH n=2 Tax=Escherichia coli RepID=E7U533_ECOLX
ccmH; heme lyase subunit
Cytochrome c-type biogenesis protein CcmH {ECO:0000313|EMBL:ELD99039.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L3_098_332G1_scaffold_244_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23294..23851)
DNA (558bp) protein (186aa)
Thiol:disulfide interchange protein DsbE n=1308 Tax=Enterobacteriaceae RepID=DSBE_ECO57
dsbE; thiol:disulfide interchange protein DsbE
Disulfide interchange protein DsbE {ECO:0000313|EMBL:KDZ19493.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L3_098_332G1_scaffold_244_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23848..25791)
DNA (1944bp) protein (648aa)
Cytochrome c heme lyase subunit CcmF n=2 Tax=Escherichia coli RepID=E7U535_ECOLX
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:EHU44564.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
ccmF; cytochrome c-type biogenesis protein ccmF
L3_098_332G1_scaffold_244_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25788..26267)
DNA (480bp) protein (160aa)
Cytochrome c-type biogenesis protein CcmE n=1370 Tax=Enterobacteriaceae RepID=CCME_ECO24
ccmE; periplasmic heme chaperone
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L3_098_332G1_scaffold_244_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26264..26473)
DNA (210bp) protein (70aa)
Heme exporter protein D n=1376 Tax=Enterobacteriaceae RepID=CCMD_ECO57
ccmD; heme exporter protein CcmD
Heme exporter protein CcmD {ECO:0000313|EMBL:EHU42437.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L3_098_332G1_scaffold_244_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26470..27207)
DNA (738bp) protein (246aa)
Heme exporter protein C n=1371 Tax=Enterobacteriaceae RepID=CCMC_ECO57
ccmC; heme exporter protein CcmC
CcmC {ECO:0000313|EMBL:EHU54851.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L3_098_332G1_scaffold_244_28
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27249..27911)
DNA (663bp) protein (221aa)
Heme exporter protein B n=1164 Tax=Enterobacteriaceae RepID=CCMB_ECO57
heme exporter protein CcmB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L3_098_332G1_scaffold_244_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27908..28525)
DNA (618bp) protein (206aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Cytochrome c biogenesis ATP-binding export protein CcmA n=224 Tax=Escherichia RepID=CCMA_ECOUT
ccmA; cytochrome c biogenesis protein CcmA
L3_098_332G1_scaffold_244_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28544..29146)
DNA (603bp) protein (201aa)
Cytochrome c-type protein NapC n=1279 Tax=Enterobacteriaceae RepID=NAPC_ECO57
napC; cytochrome c-type protein napC
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
Displaying items 1-30 of 59 in total

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