ggKbase home page

L3_098_332G1_scaffold_303

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_098_332G1_scaffold_303_1
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(386..1285)
DNA (900bp) protein (300aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG73590.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
AraC family transcriptional regulator
L3_098_332G1_scaffold_303_2
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1522..2400
DNA (879bp) protein (293aa)
AraC family transcriptional regulator n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EQR4_CLOPA
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:CDM70005.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_098_332G1_scaffold_303_3
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2644..4317
DNA (1674bp) protein (558aa)
Glycosidase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K5V1_CLOPA
glycosidase
Glycosidase {ECO:0000313|EMBL:AGK98532.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_098_332G1_scaffold_303_4
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4598..5206
DNA (609bp) protein (203aa)
maltose O-acetyltransferase (EC:2.3.1.79)
Maltose O-acetyltransferase n=1 Tax=Clostridium intestinale URNW RepID=U2PSA1_9CLOT
Maltose O-acetyltransferase {ECO:0000313|EMBL:ERK29340.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L3_098_332G1_scaffold_303_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5640..7148
DNA (1509bp) protein (503aa)
Ser/Thr protein phosphatase family protein n=3 Tax=Clostridium butyricum RepID=B1QT18_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36263.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metallophosphoesterase
L3_098_332G1_scaffold_303_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7252..8415
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EQR0_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ36264.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_098_332G1_scaffold_303_7
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9135..9698
DNA (564bp) protein (188aa)
Transcriptional regulator TetR family n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHF1_ACEWD
transcriptional regulator TetR family
Transcriptional regulator TetR family {ECO:0000313|EMBL:AFA49661.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_098_332G1_scaffold_303_8
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9786..10406
DNA (621bp) protein (207aa)
Putative methyltransferase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHF0_ACEWD
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AFA49660.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_098_332G1_scaffold_303_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10603..11496)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QY53_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52365.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_098_332G1_scaffold_303_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11539..12810)
DNA (1272bp) protein (424aa)
PTS system, cellobiose-specific IIC component n=2 Tax=Clostridium butyricum RepID=B1QY52_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system cellobiose-specific transporter subunit IIC
L3_098_332G1_scaffold_303_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13001..13744)
DNA (744bp) protein (248aa)
Transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=B1QZ16_CLOBU
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EEP52859.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
RpiR family transcriptional regulator
L3_098_332G1_scaffold_303_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13884..14204)
DNA (321bp) protein (107aa)
Putative HTH-type transcriptional regulator YdeP n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MHQ4_9CLOT
ydeP; putative HTH-type transcriptional regulator YdeP
Putative HTH-type transcriptional regulator YdeP {ECO:0000313|EMBL:AGF55838.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_098_332G1_scaffold_303_13
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14525..14926
DNA (402bp) protein (134aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PP18_9CLOT
Pyridoxamine 5'-phosphate oxidase-related FMN-binding {ECO:0000313|EMBL:EET89096.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
L3_098_332G1_scaffold_303_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15039..15842)
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TRB5_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:AIY81040.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L3_098_332G1_scaffold_303_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15833..16414)
DNA (582bp) protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVV4_CLOBO
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EES49047.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
RNA polymerase ECF-type sigma factor
L3_098_332G1_scaffold_303_16
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16646..17533
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000370DAE8
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABX42271.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_098_332G1_scaffold_303_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17693..18271)
DNA (579bp) protein (193aa)
chromate transporter n=1 Tax=[Clostridium] glycolicum RepID=UPI00037FD416
Uncharacterized protein {ECO:0000313|EMBL:EHI61411.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
chromate transporter
L3_098_332G1_scaffold_303_18
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(18277..18846)
DNA (570bp) protein (190aa)
chromate transporter n=1 Tax=[Clostridium] glycolicum RepID=UPI000362C59D
Uncharacterized protein {ECO:0000313|EMBL:CDB98963.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
chromate transporter
L3_098_332G1_scaffold_303_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18969..19292)
DNA (324bp) protein (108aa)
Thioredoxin domain protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MV58_CLOSA
thioredoxin domain protein
Thioredoxin domain protein {ECO:0000313|EMBL:AGX43526.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_098_332G1_scaffold_303_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19313..20059)
DNA (747bp) protein (249aa)
Putative yoxB n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W2W8_CLOBI
putative yoxB
Putative yoxB {ECO:0000313|EMBL:AIY84496.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_098_332G1_scaffold_303_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20333..20959
DNA (627bp) protein (209aa)
Heme oxygenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBW7_9CLOT
Heme oxygenase {ECO:0000313|EMBL:EKY25459.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
heme oxygenase
L3_098_332G1_scaffold_303_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21167..21649)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V1E6_CLOBA
Uncharacterized protein {ECO:0000313|EMBL:AIY81530.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L3_098_332G1_scaffold_303_23
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

comp(21799..23160)
DNA (1362bp) protein (454aa)
UPI0002E0D887 related cluster n=1 Tax=unknown RepID=UPI0002E0D887
MATE efflux family protein {ECO:0000313|EMBL:EOS59816.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
Na+-driven multidrug efflux pump
L3_098_332G1_scaffold_303_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23474..24211)
DNA (738bp) protein (246aa)
ABC transporter n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVG4_9CLOT
ABC transporter {ECO:0000313|EMBL:EOR21134.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
glnQ; glutamine ABC transporter ATP-binding protein GlnQ
L3_098_332G1_scaffold_303_25
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24224..25000)
DNA (777bp) protein (259aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BWM9_9CLOT
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:EOR21135.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
polar amino acid ABC transporter inner membrane subunit
L3_098_332G1_scaffold_303_26
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(25066..25884)
DNA (819bp) protein (273aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WGA4_FUSMR
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEO36910.2}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
extracellular solute-binding protein
L3_098_332G1_scaffold_303_27
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26581..26733)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9X3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26164.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_098_332G1_scaffold_303_28
unknown

Not on your lists

comp(26996..27202)
DNA (207bp) protein (69aa)

This feature has no annotations

L3_098_332G1_scaffold_303_29
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27570..27992)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q2X4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET84154.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
L3_098_332G1_scaffold_303_30
unknown

Not on your lists

comp(28143..28271)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

View Taxonomy